Jatropha Genome Database

JcCB1005111.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB1005111.20 + phase: 0 
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27340.1                                                       127   3e-30
Glyma08g16420.1                                                       126   4e-30
Glyma15g42900.1                                                       126   4e-30
Glyma13g41540.1                                                       124   3e-29
Glyma12g13240.1                                                       115   1e-26
Glyma06g44510.1                                                       100   4e-22
Glyma13g37140.1                                                        96   6e-21
Glyma12g33280.1                                                        96   9e-21
Glyma08g05860.1                                                        65   1e-11
Glyma05g33820.1                                                        65   2e-11
Glyma13g27360.1                                                        57   5e-09

>Glyma13g27340.1 
          Length = 369

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 64/68 (94%), Positives = 67/68 (98%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS DAF+QILKNEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ+IVFG
Sbjct: 302 MMMTSGEAVKYKSSMDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFG 361

Query: 61  KKYGSGGA 68
           KKYGSGGA
Sbjct: 362 KKYGSGGA 369


>Glyma08g16420.1 
          Length = 388

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/68 (92%), Positives = 67/68 (98%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS DAF+QILKNEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ++VFG
Sbjct: 321 MMMTSGEAVKYKSSLDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFG 380

Query: 61  KKYGSGGA 68
           KKYGSGGA
Sbjct: 381 KKYGSGGA 388


>Glyma15g42900.1 
          Length = 389

 Score =  126 bits (317), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/68 (92%), Positives = 67/68 (98%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS DAF+QILKNEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ++VFG
Sbjct: 322 MMMTSGEAVKYKSSLDAFTQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFG 381

Query: 61  KKYGSGGA 68
           KKYGSGGA
Sbjct: 382 KKYGSGGA 389


>Glyma13g41540.1 
          Length = 395

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/68 (88%), Positives = 67/68 (98%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS+DAFSQI+KNEG+KSLFKGAGANILRA+AGAGVL+GYDKLQ++V G
Sbjct: 328 MMMTSGEAVKYKSSFDAFSQIVKNEGSKSLFKGAGANILRAVAGAGVLSGYDKLQVLVLG 387

Query: 61  KKYGSGGA 68
           KKYGSGGA
Sbjct: 388 KKYGSGGA 395


>Glyma12g13240.1 
          Length = 371

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/67 (86%), Positives = 62/67 (92%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVFG 60
           MMMTSGEAVKYKSS  AF  I+ NEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ+I+FG
Sbjct: 304 MMMTSGEAVKYKSSLHAFQTIVANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLILFG 363

Query: 61  KKYGSGG 67
           KKYGSGG
Sbjct: 364 KKYGSGG 370


>Glyma06g44510.1 
          Length = 372

 Score =  100 bits (248), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 54/59 (91%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVF 59
           MMMTSGEAVKYKSS  AF  I+ NEGAKSLFKGAGANILRA+AGAGVLAGYDKLQ+++F
Sbjct: 304 MMMTSGEAVKYKSSLHAFQTIVANEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLVLF 362


>Glyma13g37140.1 
          Length = 367

 Score = 96.3 bits (238), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 53/59 (89%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVF 59
           MMMTSGEAVKYKSS +AF  I+  EG KSLFKGAGANILRA+AGAGVLAGYDKLQ+I+F
Sbjct: 299 MMMTSGEAVKYKSSLEAFKIIVAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLILF 357


>Glyma12g33280.1 
          Length = 367

 Score = 95.9 bits (237), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 47/59 (79%), Positives = 53/59 (89%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMIVF 59
           MMMTSGEAVKYKSS +AF  I+  EG KSLFKGAGANILRA+AGAGVLAGYDKLQ+++F
Sbjct: 299 MMMTSGEAVKYKSSLEAFKIIVAKEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLVLF 357


>Glyma08g05860.1 
          Length = 314

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 42/57 (73%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMI 57
           MM+TSG   KY ++  AF +I++ EG ++LF+G  AN+L  +AGAGVLAGYD+L  I
Sbjct: 242 MMLTSGHPNKYCTAIHAFQEIVRQEGFRALFRGVTANMLLGMAGAGVLAGYDQLNRI 298


>Glyma05g33820.1 
          Length = 314

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 42/57 (73%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSLFKGAGANILRAIAGAGVLAGYDKLQMI 57
           MM+TSG   KY ++  AF +I++ EG ++LF+G  AN+L  +AGAGVLAGYD+L  I
Sbjct: 242 MMLTSGHPNKYCTAIHAFQEIVRQEGFRALFRGFTANMLLGMAGAGVLAGYDQLNRI 298


>Glyma13g27360.1 
          Length = 305

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 29/30 (96%)

Query: 1   MMMTSGEAVKYKSSYDAFSQILKNEGAKSL 30
           MMMTSGEAVKYKSS DAF+QIL+NEGAKSL
Sbjct: 276 MMMTSGEAVKYKSSMDAFAQILENEGAKSL 305