Jatropha Genome Database

JcCB1003421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB1003421.10 - phase: 0 /pseudo/partial
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36440.1                                                       118   1e-27
Glyma17g08230.1                                                       118   2e-27
Glyma17g33930.1                                                       110   3e-25
Glyma05g00820.1                                                       104   3e-23
Glyma17g11100.1                                                       103   3e-23
Glyma06g21190.1                                                       102   9e-23
Glyma04g14770.1                                                       102   9e-23
Glyma09g34830.1                                                       100   3e-22
Glyma04g32990.1                                                       100   3e-22
Glyma07g27470.1                                                        62   1e-10
Glyma16g03050.1                                                        50   5e-07
Glyma07g06440.1                                                        50   6e-07
Glyma01g40080.1                                                        49   1e-06
Glyma17g17460.1                                                        49   1e-06
Glyma11g05220.1                                                        48   2e-06
Glyma05g22410.1                                                        47   3e-06

>Glyma02g36440.1 
          Length = 1138

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 65/69 (94%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESKLRVFSFK+QF+SQVSDLR SL+VVN+ +EEIRNS KLKRIMQTILSLGNAL
Sbjct: 879 MKVPRVESKLRVFSFKIQFNSQVSDLRNSLSVVNAASEEIRNSVKLKRIMQTILSLGNAL 938

Query: 61  NQGTARGKS 69
           NQGTA+G +
Sbjct: 939 NQGTAKGSA 947


>Glyma17g08230.1 
          Length = 1132

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 65/69 (94%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESKLRVFSF++QF+SQVSDLR SL+VVNS +EEIRNS KLKRIMQTILSLGNAL
Sbjct: 853 MKVPRVESKLRVFSFRIQFNSQVSDLRNSLSVVNSASEEIRNSVKLKRIMQTILSLGNAL 912

Query: 61  NQGTARGKS 69
           NQGTA+G +
Sbjct: 913 NQGTAKGSA 921


>Glyma17g33930.1 
          Length = 1322

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 62/69 (89%)

Query: 1    MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
            M+VPRVE+KLRVF+FKMQF +QVS+L++ LN+VN  +E+IRNS KLKRIMQTILSLGNAL
Sbjct: 1055 MKVPRVENKLRVFAFKMQFLTQVSELKRDLNIVNDASEQIRNSVKLKRIMQTILSLGNAL 1114

Query: 61   NQGTARGKS 69
            N GTARG +
Sbjct: 1115 NHGTARGSA 1123


>Glyma05g00820.1 
          Length = 1005

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESKLRVF+FK+QF+SQV + +KSLN VNS  EE+RNS KLK IM+ IL LGN L
Sbjct: 748 MKVPRVESKLRVFAFKIQFNSQVMEFKKSLNTVNSACEEVRNSVKLKDIMKKILYLGNTL 807

Query: 61  NQGTARGKS 69
           NQGTARG +
Sbjct: 808 NQGTARGSA 816


>Glyma17g11100.1 
          Length = 1312

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 58/69 (84%)

Query: 1    MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
            M+VPRVESKLRVF+FK+QF SQV++ +KSLN VNS  EE+RNS KLK IM+ IL LGN L
Sbjct: 1055 MKVPRVESKLRVFAFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILYLGNTL 1114

Query: 61   NQGTARGKS 69
            NQGTARG +
Sbjct: 1115 NQGTARGSA 1123


>Glyma06g21190.1 
          Length = 1075

 Score =  102 bits (254), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/69 (68%), Positives = 57/69 (82%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESK RVFSFK+QF +Q+++ +KSLN VNS  EE+RNS KLK IM+ IL LGN L
Sbjct: 915 MKVPRVESKFRVFSFKIQFRTQITEFKKSLNTVNSACEEVRNSFKLKEIMKKILYLGNTL 974

Query: 61  NQGTARGKS 69
           NQGTARG +
Sbjct: 975 NQGTARGSA 983


>Glyma04g14770.1 
          Length = 1179

 Score =  102 bits (254), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/69 (66%), Positives = 60/69 (86%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESKLRVF+FK+ F SQV+DL+ +LN +N+ A E++ S KL++IMQTIL+LGNAL
Sbjct: 923 MKVPRVESKLRVFAFKINFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNAL 982

Query: 61  NQGTARGKS 69
           NQGTARG +
Sbjct: 983 NQGTARGSA 991


>Glyma09g34830.1 
          Length = 1211

 Score =  100 bits (249), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/69 (65%), Positives = 59/69 (85%)

Query: 1    MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
            M+VPRVESKLRVF+FK+ F SQV+DL+ +LN +N+ A E++ S KL++IMQTIL+LGNAL
Sbjct: 938  MKVPRVESKLRVFAFKITFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNAL 997

Query: 61   NQGTARGKS 69
            NQGT RG +
Sbjct: 998  NQGTTRGSA 1006


>Glyma04g32990.1 
          Length = 1148

 Score =  100 bits (249), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           M+VPRVESK RVFSFK+QF +Q+++ +KSLN VN+  EE+RNS KLK IM+ IL LGN L
Sbjct: 887 MKVPRVESKFRVFSFKIQFRTQITEFKKSLNTVNAACEEVRNSFKLKEIMKKILYLGNTL 946

Query: 61  NQGTARGKS 69
           NQGT RG +
Sbjct: 947 NQGTTRGSA 955


>Glyma07g27470.1 
          Length = 144

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/61 (57%), Positives = 37/61 (60%), Gaps = 17/61 (27%)

Query: 7  ESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNALNQGTAR 66
          E+KLR F+FKMQF SQ                 IRNS KLKRIMQTILSLGN  N GT R
Sbjct: 31 ENKLRFFAFKMQFLSQ-----------------IRNSVKLKRIMQTILSLGNVFNHGTIR 73

Query: 67 G 67
          G
Sbjct: 74 G 74


>Glyma16g03050.1 
          Length = 856

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + VP    ++    +   F S+V  LRKS   + +  EE+RNS    ++++ +L  GN +
Sbjct: 555 LDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLETACEELRNSRMFLKLLEAVLKTGNRM 614

Query: 61  NQGTARGKSNFYQCCLSTMKFLV 83
           N GT RG ++ ++  L T+  LV
Sbjct: 615 NVGTNRGDAHAFK--LDTLLKLV 635


>Glyma07g06440.1 
          Length = 755

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + VP    ++    +   F S+V  LRKS   + +  EE+RNS    ++++ +L  GN +
Sbjct: 453 LDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRM 512

Query: 61  NQGTARGKSNFYQCCLSTMKFLV 83
           N GT RG ++ ++  L T+  LV
Sbjct: 513 NVGTNRGDAHAFK--LDTLLKLV 533


>Glyma01g40080.1 
          Length = 889

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + +P    ++    ++  F ++V+ LRKS   + + +EEI+NS    ++++ +L  GN +
Sbjct: 593 LDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTMEAASEEIKNSRLFLKLLEAVLRTGNRM 652

Query: 61  NQGTARGKSNFYQCCLSTMKFLV 83
           N GT RG +  ++  L T+  LV
Sbjct: 653 NVGTNRGDAKAFK--LDTLLKLV 673


>Glyma17g17460.1 
          Length = 884

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + +P    ++    ++  F ++V+ LRKS   + + +EE++NS    ++++ +L  GN +
Sbjct: 587 LDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRM 646

Query: 61  NQGTARGKSNFYQCCLSTMKFLV 83
           N GT RG +  ++  L T+  LV
Sbjct: 647 NVGTNRGGAKSFK--LDTLLKLV 667


>Glyma11g05220.1 
          Length = 895

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 2/83 (2%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + +P    ++    ++  F ++V+ LRKS   + + +EE++NS    ++++ +L  GN +
Sbjct: 599 LDIPFAFKRVEAMLYRANFDAEVNYLRKSFQTMEAASEELKNSRLFLKLLEAVLRTGNRM 658

Query: 61  NQGTARGKSNFYQCCLSTMKFLV 83
           N GT RG +  ++  L T+  LV
Sbjct: 659 NVGTNRGDAKAFK--LDTLLKLV 679


>Glyma05g22410.1 
          Length = 889

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 39/67 (58%)

Query: 1   MQVPRVESKLRVFSFKMQFHSQVSDLRKSLNVVNSTAEEIRNSAKLKRIMQTILSLGNAL 60
           + +P    ++    ++  F ++V+ LRKS   ++  +EE++NS    ++++ +L  GN +
Sbjct: 592 LDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLDVASEELKNSRLFLKLLEAVLRTGNRM 651

Query: 61  NQGTARG 67
           N GT RG
Sbjct: 652 NVGTNRG 658