Jatropha Genome Database

JcCB0979461.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0979461.10 - phase: 2 /partial
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g33610.1                                                       141   2e-34
Glyma02g14870.1                                                       132   6e-32
Glyma12g35750.1                                                        88   2e-18
Glyma13g34650.1                                                        87   3e-18

>Glyma07g33610.1 
          Length = 468

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/113 (65%), Positives = 85/113 (75%)

Query: 11  LQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAVLHNQGLLKDKKATAHPSVEN 70
           L G  AGAQR            EQ++A RIYGAVCSS A+L  QGLLKDK+ATAH S  +
Sbjct: 351 LPGGTAGAQRLSKSRILKKLLKEQNSAERIYGAVCSSLAILQKQGLLKDKRATAHASTLD 410

Query: 71  QLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           +L +  IN AKVVIDGK+ITS+G ATVTDFA+AIVSKLFG+ RARSVAEGLVF
Sbjct: 411 KLKDKEINGAKVVIDGKLITSEGLATVTDFALAIVSKLFGNGRARSVAEGLVF 463



 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 1/119 (0%)

Query: 6   FFLSELQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAV-LHNQGLLKDKKATA 64
           F L  L G + G+ R             Q    R+YGA+C++PAV L   GLLK KK T 
Sbjct: 123 FDLVALPGGMPGSARLRDCDVLRKITCRQAEENRLYGAICAAPAVTLLPWGLLKKKKITC 182

Query: 65  HPSVENQLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           HP+  ++L       + + +   + TS+G  T   FA+++  +LFG + A  VAE ++ 
Sbjct: 183 HPAFYDRLPRFWAVKSNLQVSRGLTTSRGPGTTYQFALSLAEQLFGDSVANEVAESMII 241


>Glyma02g14870.1 
          Length = 342

 Score =  132 bits (333), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/113 (63%), Positives = 82/113 (72%)

Query: 11  LQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPAVLHNQGLLKDKKATAHPSVEN 70
           L G  AGAQR            EQ++A RIYGAV SS A+L  QGLLKDK+ TAHPSV  
Sbjct: 223 LPGGTAGAQRLSKSRILKKLLKEQNSAKRIYGAVYSSLAILQKQGLLKDKRTTAHPSVLV 282

Query: 71  QLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGLVF 123
           +L +  IN AKV IDGK+ITS+  ATVTDFA+AIVSKLFG+ RARSVAEGLVF
Sbjct: 283 KLKDEEINGAKVDIDGKLITSEVLATVTDFALAIVSKLFGNGRARSVAEGLVF 335


>Glyma12g35750.1 
          Length = 435

 Score = 87.8 bits (216), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 1/123 (0%)

Query: 2   CRFFFFLSELQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPA-VLHNQGLLKDK 60
            +  + L  L G + GAQ             +Q  +   YGA+C+SPA VL   GLLK K
Sbjct: 310 AKLSYDLIVLPGGLGGAQTFANSETLVSLLKKQRESNIYYGAICASPALVLEPHGLLKGK 369

Query: 61  KATAHPSVENQLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEG 120
           KATA P + N+LS+    + +VV+DG +ITS+G  T  +FA+AIV KLFG   A  +A+ 
Sbjct: 370 KATAFPVMCNKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELAKA 429

Query: 121 LVF 123
           +VF
Sbjct: 430 VVF 432



 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 3/89 (3%)

Query: 38  GRIYGAVCSSPAV-LHNQGLLKDKKATAHPSVENQLSNNV--INDAKVVIDGKVITSKGH 94
           GR+Y AVC++PAV L   GLL  KKAT +P++  +L+      ++++V +DG+V+TS+  
Sbjct: 140 GRLYAAVCAAPAVVLGPWGLLNGKKATCYPALMEKLAAYAAATSESRVQVDGRVVTSRAP 199

Query: 95  ATVTDFAMAIVSKLFGHARARSVAEGLVF 123
            T  +FA+ ++ +L G  +A  VA  LV 
Sbjct: 200 GTTMEFAITLIEQLIGKEKADEVAGPLVM 228


>Glyma13g34650.1 
          Length = 394

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/122 (40%), Positives = 71/122 (58%), Gaps = 1/122 (0%)

Query: 3   RFFFFLSELQGEIAGAQRXXXXXXXXXXXXEQDAAGRIYGAVCSSPA-VLHNQGLLKDKK 61
           +  + L  L G + GAQ             +Q  + + YGA+C+SPA VL   GLLK KK
Sbjct: 270 KLSYDLIVLPGGLGGAQTFANSETLVSLLKKQRESNKYYGAICASPALVLEPHGLLKGKK 329

Query: 62  ATAHPSVENQLSNNVINDAKVVIDGKVITSKGHATVTDFAMAIVSKLFGHARARSVAEGL 121
           ATA P + ++LS+    + +VV+DG +ITS+G  T  +FA+AIV KLFG   A  +A  +
Sbjct: 330 ATAFPVMCDKLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRKLALELANAV 389

Query: 122 VF 123
           VF
Sbjct: 390 VF 391



 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 38  GRIYGAVCSSPAV-LHNQGLLKDKKATAHPSVENQLSNNV--INDAKVVIDGKVITSKGH 94
           GR+Y AVC++PAV L   GLL  KKAT +P++  +L+  V   ++++V +DG V+TS+  
Sbjct: 99  GRLYAAVCAAPAVVLGPWGLLNGKKATCYPALMEKLAAYVAATSESRVQVDGTVVTSRAP 158

Query: 95  ATVTDFAMAIVSKLFGHARARSVAEGLVF 123
            T  +FA+A++ +L G  +A  VA  LV 
Sbjct: 159 GTTMEFAIALIEQLIGKEKAYEVAGPLVM 187