Jatropha Genome Database

JcCB0971961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0971961.10 - phase: 0 
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g33480.1                                                       189   7e-49
Glyma18g04730.1                                                       186   5e-48

>Glyma11g33480.1 
          Length = 747

 Score =  189 bits (480), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 97/143 (67%), Positives = 107/143 (74%), Gaps = 5/143 (3%)

Query: 1   MGLGILASRVIRPHA-----TKPRNLLLLRSIVTKPELQSXXXXXXXXXXXXXXXXXXXX 55
           MGLG+LAS+ IRP +     ++     LLR+IV+KPEL++                    
Sbjct: 1   MGLGLLASKAIRPTSRLLLGSQNPTTFLLRTIVSKPELRNPEASAAQPEQPPAPDLPPRT 60

Query: 56  XXXGARVHFPNPDDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR 115
              GARVHF NP+DAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR
Sbjct: 61  PLAGARVHFSNPEDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR 120

Query: 116 MCLVEVEKSPKPVASCAMPALPG 138
           MCLVEVEKSPKPVASCAMPALPG
Sbjct: 121 MCLVEVEKSPKPVASCAMPALPG 143


>Glyma18g04730.1 
          Length = 746

 Score =  186 bits (473), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 94/143 (65%), Positives = 108/143 (75%), Gaps = 5/143 (3%)

Query: 1   MGLGILASRVIRPHA-----TKPRNLLLLRSIVTKPELQSXXXXXXXXXXXXXXXXXXXX 55
           MGL +LAS+ +RP +     ++  +  LLR+IV+KP+L++                    
Sbjct: 1   MGLALLASKAVRPTSRLLFGSQNPSTFLLRTIVSKPQLRNPEATAAHPEQPPPADLPPRT 60

Query: 56  XXXGARVHFPNPDDAIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR 115
              GARVHFPNP+D+IEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR
Sbjct: 61  PLAGARVHFPNPEDSIEVFVDGYPVKIPKGMTVLQACEVAGVDIPRFCYHSRLSIAGNCR 120

Query: 116 MCLVEVEKSPKPVASCAMPALPG 138
           MCLVEVEKSPKPVASCAMPALPG
Sbjct: 121 MCLVEVEKSPKPVASCAMPALPG 143