Jatropha Genome Database

JcCB0960711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0960711.10 - phase: 0 /pseudo
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g43850.1                                                       192   2e-49
Glyma02g43860.1                                                       176   1e-44
Glyma14g05060.1                                                       174   8e-44
Glyma20g11530.1                                                       154   7e-38
Glyma11g06740.1                                                        56   2e-08
Glyma15g11780.1                                                        54   8e-08
Glyma01g38560.1                                                        51   8e-07

>Glyma02g43850.1 
          Length = 615

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/193 (48%), Positives = 128/193 (66%), Gaps = 5/193 (2%)

Query: 19  SFKAEAKCKSGCELSLASYNVWEGVNLTYISNLFXPNHPSNSP----FTIPNVTNQDSIL 74
           +F AE+KC  GC+L+LASY + +G +LTY+S L      S       +    +TN+D + 
Sbjct: 7   AFSAESKCSRGCDLALASYYLSQG-DLTYVSKLMESEVVSKPEDILSYNTDTITNKDLLP 65

Query: 75  VDTRLNIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTR 134
              R+N+PF CDC++ +FLGHTF+Y    GDTY  IA   ++NLTT +W+   N Y    
Sbjct: 66  ASIRVNVPFPCDCIDEEFLGHTFQYNLTTGDTYLSIATQNYSNLTTAEWLRSFNRYLPAN 125

Query: 135 IPDYVPINVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKN 194
           IPD   +NVT+NCSCG+  VSKDYGLF TYPL   D+L S+A E+GV  DLL +YNPG N
Sbjct: 126 IPDSGTLNVTINCSCGNSEVSKDYGLFITYPLRPEDSLQSIANETGVDRDLLVKYNPGVN 185

Query: 195 FSEGSGIIFVPAK 207
           FS+GSG++++P K
Sbjct: 186 FSQGSGLVYIPGK 198


>Glyma02g43860.1 
          Length = 628

 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 1/188 (0%)

Query: 20  FKAEAKCKSGCELSLASYNVWEGVNLTYISNLFXPNHPSNSPFTIPNVTNQDSILVDTRL 79
           +  E+KC  GC+++ ASY V   ++L  I+ L   +      F   N++N    L   RL
Sbjct: 19  YNVESKCVKGCDVAFASYYVSPDLSLENIARLMESSIEVIISFNEDNISNGYP-LSFYRL 77

Query: 80  NIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIPDYV 139
           NIPF CDC+ G+FLGH F+Y+   GDTYD IAK  +ANLTT + + R N Y    IP   
Sbjct: 78  NIPFPCDCIGGEFLGHVFEYSASAGDTYDSIAKVTYANLTTVELLRRFNGYDQNGIPANA 137

Query: 140 PINVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFSEGS 199
            +NVTVNCSCG+ +VSKDYG+F TYPL   +NL  +A E+ +   LLQRYNPG NFS+ S
Sbjct: 138 RVNVTVNCSCGNSQVSKDYGMFITYPLRPGNNLHDIANEARLDAQLLQRYNPGVNFSKES 197

Query: 200 GIIFVPAK 207
           G +F+P +
Sbjct: 198 GTVFIPGR 205


>Glyma14g05060.1 
          Length = 628

 Score =  174 bits (440), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/191 (49%), Positives = 122/191 (63%), Gaps = 4/191 (2%)

Query: 22  AEAKCKSGCELSLASYNVWEG-VNLTYISNLFXPNHPSNSPFTIPNVTN--QDSILVDTR 78
           AE+KC  GC+++LASY V  G + L  I+ L      SNS   I N      +++L  +R
Sbjct: 20  AESKCVKGCDVALASYYVSPGYLLLENITRLMESIVLSNSDVIIYNKDKIFNENVLAFSR 79

Query: 79  LNIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIPDY 138
           LNIPF C C++G+FLGH F+Y+   GDTYD IAK  +ANLTT + + R N Y    IP  
Sbjct: 80  LNIPFPCGCIDGEFLGHVFEYSASAGDTYDSIAKVTYANLTTVELLRRFNSYDQNGIPAN 139

Query: 139 VPINVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFSEG 198
             +NVTVNCSCG+ +VSKDYGLF TY L   +NL  +A E+ +   LLQ YNPG NFS+ 
Sbjct: 140 ATVNVTVNCSCGNSQVSKDYGLFITYLLRPGNNLHDIANEARLDAQLLQSYNPGVNFSKE 199

Query: 199 SG-IIFVPAKG 208
           SG I+F+P K 
Sbjct: 200 SGDIVFIPGKA 210


>Glyma20g11530.1 
          Length = 500

 Score =  154 bits (389), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 1/141 (0%)

Query: 67  VTNQDSILVDTRLNIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHR 126
           V ++D I+ D R+N+PF CDC++G FLGHTF+Y  Q  DTY+ +A+  FANLT   W+ R
Sbjct: 20  VPSKDIIIADQRVNVPFPCDCIDGQFLGHTFRYDVQSQDTYETVARSWFANLTDVAWLRR 79

Query: 127 VNIYKTTRIPDYVPINVTVNCSCGDKRVSKDYGLFTTYPLGAADNLSSLAEESGVRPDLL 186
            N Y    IPD   +NVTVNCSCG+  V+ +YGLF TYPL   D L S+A    +   LL
Sbjct: 80  FNTYPPDNIPDTGTLNVTVNCSCGNTDVA-NYGLFVTYPLRIGDTLGSVAANLSLDSALL 138

Query: 187 QRYNPGKNFSEGSGIIFVPAK 207
           QRYNP  NF++G+G+++VP K
Sbjct: 139 QRYNPDVNFNQGTGLVYVPGK 159


>Glyma11g06740.1 
          Length = 541

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 14/172 (8%)

Query: 43  VNLTYISNLFXPNHPSNSPFTIPNVTN----QDSILVDTRLNIPFSCDCLNGDFLGHTFK 98
           ++LT ISN+F       SP +I   +N     D ++ D  L +P +C C  G+       
Sbjct: 43  LSLTNISNIF-----DTSPLSIARASNLEPMDDKLVKDQVLLVPVTCGC-TGNRSFANIS 96

Query: 99  YTTQPGDTYDRIAKYAFANLTTEDWVHRVN-IYKTTRIPDYVPINVTVNCSCGDK-RVSK 156
           Y    GD++  +A  ++ NLT    V  +N +    ++P  + +   + C C  K ++ K
Sbjct: 97  YEINQGDSFYFVATTSYENLTNWRAVMDLNPVLSPNKLPIGIQVVFPLFCKCPSKNQLDK 156

Query: 157 DYGLFTTYPLGAADNLSSLAEESGVRP-DLLQRYNPGKNFSEGSGI-IFVPA 206
           +     TY     DN+S ++++ G  P D++   N G+NF+  + + + +P 
Sbjct: 157 EIKYLITYVWKPGDNVSLVSDKFGASPEDIMSENNYGQNFTAANNLPVLIPV 208


>Glyma15g11780.1 
          Length = 385

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query: 163 TYPLGAADNLSSLAEESGVRPDLLQRYNPGKNFSEGSGIIFVPAK 207
           TYPL   D+L  +A E+GV  +LL RYNP  +F  G+G++FVPAK
Sbjct: 2   TYPLRVGDSLQRVAAEAGVPAELLLRYNPTADFGAGNGLVFVPAK 46


>Glyma01g38560.1 
          Length = 594

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%)

Query: 79  LNIPFSCDCLNGDFLGHTFKYTTQPGDTYDRIAKYAFANLTTEDWVHRVNIYKTTRIPDY 138
           L IP +C C  G+       Y   PGD+++ +A  ++ NLT    V  +N    +  P+ 
Sbjct: 93  LLIPVTCGC-TGNRSFANISYEINPGDSFNFVATTSYENLTNWRVVMDLN---PSLSPNT 148

Query: 139 VPINVTVN----CSCGDK-RVSKDYGLFTTYPLGAADNLSSLAEESGVRP-DLLQRYNPG 192
           +PI + V     C C  K ++ K      TY    +DN+S ++E+ G  P D+L   N G
Sbjct: 149 LPIGIQVVFPLFCKCPSKNQLDKGIKYLITYVWQPSDNVSLVSEKFGASPEDILSENNYG 208

Query: 193 KNFSEGSGI-IFVPA 206
           +NF+  + + + +P 
Sbjct: 209 QNFTAANNLPVLIPV 223