Jatropha Genome Database

JcCB0954251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0954251.10 - phase: 2 /partial
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g08180.1                                                        70   6e-13
Glyma16g27210.1                                                        69   1e-12

>Glyma02g08180.1 
          Length = 501

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/33 (93%), Positives = 32/33 (96%)

Query: 1   RQEKTVMKLVVDAATDKVLGASMCGPDAPEVIQ 33
           RQEKTVMKLVVDA TDKVLGASMCGPDAPE+IQ
Sbjct: 418 RQEKTVMKLVVDAETDKVLGASMCGPDAPEIIQ 450


>Glyma16g27210.1 
          Length = 501

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/33 (90%), Positives = 32/33 (96%)

Query: 1   RQEKTVMKLVVDAATDKVLGASMCGPDAPEVIQ 33
           RQEKTVMKLVVDA TDKVLGASMCGPDAPE++Q
Sbjct: 418 RQEKTVMKLVVDAETDKVLGASMCGPDAPEIMQ 450