Jatropha Genome Database

JcCB0942771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0942771.10 + phase: 0 /pseudo/partial
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g35560.1                                                        76   8e-15
Glyma10g35560.2                                                        74   3e-14
Glyma20g31980.1                                                        74   3e-14
Glyma14g36410.1                                                        60   6e-10

>Glyma10g35560.1 
          Length = 436

 Score = 76.3 bits (186), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 37/49 (75%), Positives = 43/49 (87%)

Query: 1   MKYGVRAVKGGGRSSARETIGRVAPGAIAKKILKQFSGTEVVIGVKRGY 49
           MKYGVR+V+GGGRSSARETIGRVA GA+AKKILK FSGTE++  V + Y
Sbjct: 162 MKYGVRSVQGGGRSSARETIGRVASGAVAKKILKDFSGTEILAYVSQVY 210


>Glyma10g35560.2 
          Length = 389

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 37/49 (75%), Positives = 43/49 (87%)

Query: 1   MKYGVRAVKGGGRSSARETIGRVAPGAIAKKILKQFSGTEVVIGVKRGY 49
           MKYGVR+V+GGGRSSARETIGRVA GA+AKKILK FSGTE++  V + Y
Sbjct: 162 MKYGVRSVQGGGRSSARETIGRVASGAVAKKILKDFSGTEILAYVSQVY 210


>Glyma20g31980.1 
          Length = 435

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/42 (83%), Positives = 41/42 (97%)

Query: 1   MKYGVRAVKGGGRSSARETIGRVAPGAIAKKILKQFSGTEVV 42
           MKYGVR+V+GGGRSSARETIGRVA GA+AKKILK+FSGTE++
Sbjct: 161 MKYGVRSVQGGGRSSARETIGRVASGAVAKKILKEFSGTEIL 202


>Glyma14g36410.1 
          Length = 214

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/34 (85%), Positives = 33/34 (97%)

Query: 1   MKYGVRAVKGGGRSSARETIGRVAPGAIAKKILK 34
           MKYG+R+V+GGGRSSARETIGRVA GA+AKKILK
Sbjct: 101 MKYGLRSVQGGGRSSARETIGRVASGAVAKKILK 134