Jatropha Genome Database

JcCB0902641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0902641.10 - phase: 0 /pseudo/partial
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g08940.1                                                        79   1e-15
Glyma01g36450.1                                                        77   5e-15

>Glyma11g08940.1 
          Length = 778

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 38/60 (63%), Positives = 50/60 (83%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQ A+A+ +KELAERD AL N K+QI+S+EIKLDSANA+H  EKE W  +LQN++E+W+
Sbjct: 446 DLQSAMANHEKELAERDTALENVKQQIRSLEIKLDSANAKHLKEKEEWGLSLQNVQETWR 505


>Glyma01g36450.1 
          Length = 740

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/61 (60%), Positives = 48/61 (78%)

Query: 3   DLQDALAHRDKELAERDAALNNSKKQIKSIEIKLDSANARHQLEKEAWETNLQNLEESWK 62
           DLQ A+A+ +KE+AERD AL N K+QI+S EIKLDSAN +H  EKE W  +LQN+EE+W+
Sbjct: 447 DLQSAMANHEKEIAERDTALENVKQQIRSFEIKLDSANVKHLKEKEEWGLSLQNVEETWR 506

Query: 63  C 63
            
Sbjct: 507 I 507