Jatropha Genome Database

JcCB0897541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0897541.10 + phase: 2 /pseudo/partial
         (423 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g36730.1                                                       665   0.0  
Glyma12g33760.1                                                       663   0.0  
Glyma12g14420.1                                                       655   0.0  
Glyma06g43550.2                                                       578   e-165
Glyma06g43550.1                                                       509   e-144
Glyma04g35250.1                                                       229   4e-60
Glyma07g28950.1                                                        86   7e-17
Glyma15g22080.1                                                        66   6e-11
Glyma18g42720.1                                                        54   3e-07

>Glyma13g36730.1 
          Length = 586

 Score =  665 bits (1717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/384 (82%), Positives = 343/384 (89%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSFAEARAAGF+EE+GTLGDIWET++GSDLV+LLISD+AQADNYE
Sbjct: 141 AKSDIVVKIGLRKGSRSFAEARAAGFSEENGTLGDIWETVSGSDLVMLLISDSAQADNYE 200

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KI SHMKPNSI                 DFPKNISVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 201 KILSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 260

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGIN+SFAVHQDVDGRA DVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAVHGV
Sbjct: 261 AGINASFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGV 320

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYTENGMNED+AYKNTVE              MLAVYN+LS++ KR+FE AYSA
Sbjct: 321 VESLFRRYTENGMNEDLAYKNTVESITGIISKTISTKGMLAVYNALSEDEKREFEKAYSA 380

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           ++YPCM+ILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGERVR+
Sbjct: 381 SFYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRS 440

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           TRP  D GPLYPFTAGVFVALMMAQIE+LRKKGHSYSEIINES+IEAVDSLNPFMHARGV
Sbjct: 441 TRPAGDQGPLYPFTAGVFVALMMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGV 500

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 501 SFMVDNCSTTARLGSRKWAPRFDY 524


>Glyma12g33760.1 
          Length = 586

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/384 (82%), Positives = 342/384 (89%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ ++++IGLRKGSRSFAEARAAGF+EE+GTLGDIWET++GSDLV+LLISD+AQADNYE
Sbjct: 141 AKSDIVVKIGLRKGSRSFAEARAAGFSEENGTLGDIWETVSGSDLVMLLISDSAQADNYE 200

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KI SHMKPNSI                 DFPKNISVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 201 KILSHMKPNSILGLSHGFLLGHLQSLGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 260

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGIN+SFAVHQDVDGRA DVALGWSVALGSPFTFATTLEQEY+SDIFGERGILLGAVHGV
Sbjct: 261 AGINASFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILLGAVHGV 320

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYT+NGMNED+AYKNTVE              MLAVYN+LS++ KR+FE AYSA
Sbjct: 321 VESLFRRYTDNGMNEDLAYKNTVESITGIISKTISTKGMLAVYNALSEDEKREFEKAYSA 380

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           +YYPCM+ILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMG IDQTRMWKVGERVR+
Sbjct: 381 SYYPCMEILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGERVRS 440

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           TR   D GPLYPFTAGVFVALMMAQIE+LRKKGHSYSEIINES+IEAVDSLNPFMHARGV
Sbjct: 441 TRAAGDQGPLYPFTAGVFVALMMAQIEILRKKGHSYSEIINESVIEAVDSLNPFMHARGV 500

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 501 SFMVDNCSTTARLGSRKWAPRFDY 524


>Glyma12g14420.1 
          Length = 576

 Score =  655 bits (1689), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/384 (81%), Positives = 341/384 (88%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQADNYE 99
           +K+ +++++GLRKGSRSF EARAAGF+EE+GTLGDIWETI+GSDLVLLLISDAAQADNYE
Sbjct: 130 AKSDIVVKVGLRKGSRSFNEARAAGFSEENGTLGDIWETISGSDLVLLLISDAAQADNYE 189

Query: 100 KIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQGKEING 159
           KIFSHMKPNSI                 DFPK+ SVIAVCPKGMGPSVRRLYVQGKEING
Sbjct: 190 KIFSHMKPNSILGLSHGFLLGHLQSIGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEING 249

Query: 160 AGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGV 219
           AGINSSFAVHQDVDGRA DVAL WSVALGSPFTFAT+LE EY+SDIFGERGILLGAVHG+
Sbjct: 250 AGINSSFAVHQDVDGRATDVALAWSVALGSPFTFATSLEMEYRSDIFGERGILLGAVHGI 309

Query: 220 VECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFETAYSA 279
           VE LFRRYTE+GM+ED+AY NTVE              MLAVYN+LS++ KR+FE AYSA
Sbjct: 310 VESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSEDEKREFEKAYSA 369

Query: 280 AYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRA 339
           +YYPCMDILYECYED+A+GSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVR+
Sbjct: 370 SYYPCMDILYECYEDIAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRS 429

Query: 340 TRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAVDSLNPFMHARGV 399
           TRP  DLGPLYPFTAGV+VALMMAQIE+LRKKGHSYSEIINES+IE+VDSLNPFMHARGV
Sbjct: 430 TRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGV 489

Query: 400 SFMVDNCSTTARLGSRKWAPRFDY 423
           SFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 490 SFMVDNCSTTARLGSRKWAPRFDY 513


>Glyma06g43550.2 
          Length = 475

 Score =  578 bits (1490), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 290/396 (73%), Positives = 319/396 (80%), Gaps = 25/396 (6%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIW------------ETIAGSDLVLL 87
           +K+ ++++IGLRKGS    EARAAGF+EE+GTLGDIW            ETI+GSDLVLL
Sbjct: 47  AKSDIVVKIGLRKGSLLINEARAAGFSEENGTLGDIWVSEENGTLGDIWETISGSDLVLL 106

Query: 88  LISDAAQADNYEKIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSV 147
           LISDAAQADNYEKIFSHMKPNSI                 DFPK+ SVIAVCPKGMGPSV
Sbjct: 107 LISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSMGLDFPKHFSVIAVCPKGMGPSV 166

Query: 148 RRLYVQGKEINGAGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFG 207
           RRLYVQGKEINGAGINS          RA DVAL WSVALGSPFTFATTLE EY+S    
Sbjct: 167 RRLYVQGKEINGAGINSR------CGWRATDVALAWSVALGSPFTFATTLEMEYRS---- 216

Query: 208 ERGILLGAVHGVVECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSD 267
              ILLGAVHG+VE LFRRYTE+GM+ED+AY NTVE              MLAVYN+LS+
Sbjct: 217 ---ILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSE 273

Query: 268 EGKRDFETAYSAAYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQ 327
           + KR+FE AYSA+YYPCMDI+YECYED+A+GSEIRSVVLAGR FYEKEGLPAFPMGKIDQ
Sbjct: 274 DEKREFEKAYSASYYPCMDIMYECYEDIAAGSEIRSVVLAGRCFYEKEGLPAFPMGKIDQ 333

Query: 328 TRMWKVGERVRATRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAV 387
           TRMWKVGE VR+TRP  DLGPLYPFTAGV+VALM+AQIE+LRKKGHSYSEIINES+IE+V
Sbjct: 334 TRMWKVGEHVRSTRPAGDLGPLYPFTAGVYVALMIAQIEILRKKGHSYSEIINESVIESV 393

Query: 388 DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY 423
           DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 394 DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY 429


>Glyma06g43550.1 
          Length = 488

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 262/396 (66%), Positives = 292/396 (73%), Gaps = 68/396 (17%)

Query: 40  SKAVLLLQIGLRKGSRSFAEARAAGFTEESGTLGDIW------------ETIAGSDLVLL 87
           +K+ ++++IGLRKGS    EARAAGF+EE+GTLGDIW            ETI+GSDLVLL
Sbjct: 103 AKSDIVVKIGLRKGSLLINEARAAGFSEENGTLGDIWVSEENGTLGDIWETISGSDLVLL 162

Query: 88  LISDAAQADNYEKIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSV 147
           LISDAAQ+                                DFPK+ SVIAVCPKGMGPSV
Sbjct: 163 LISDAAQS-----------------------------MGLDFPKHFSVIAVCPKGMGPSV 193

Query: 148 RRLYVQGKEINGAGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFG 207
           RRLYVQGKEINGAGINSSFAVHQDVDG    + L W                        
Sbjct: 194 RRLYVQGKEINGAGINSSFAVHQDVDG--GLLMLLW------------------------ 227

Query: 208 ERGILLGAVHGVVECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSD 267
             GILLGAVHG+VE LFRRYTE+GM+ED+AY NTVE              MLAVYN+LS+
Sbjct: 228 -HGILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSE 286

Query: 268 EGKRDFETAYSAAYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQ 327
           + KR+FE AYSA+YYPCMDI+YECYED+A+GSEIRSVVLAGR FYEKEGLPAFPMGKIDQ
Sbjct: 287 DEKREFEKAYSASYYPCMDIMYECYEDIAAGSEIRSVVLAGRCFYEKEGLPAFPMGKIDQ 346

Query: 328 TRMWKVGERVRATRPKDDLGPLYPFTAGVFVALMMAQIEVLRKKGHSYSEIINESLIEAV 387
           TRMWKVGE VR+TRP  DLGPLYPFTAGV+VALM+AQIE+LRKKGHSYSEIINES+IE+V
Sbjct: 347 TRMWKVGEHVRSTRPAGDLGPLYPFTAGVYVALMIAQIEILRKKGHSYSEIINESVIESV 406

Query: 388 DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY 423
           DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY
Sbjct: 407 DSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDY 442


>Glyma04g35250.1 
          Length = 184

 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/210 (60%), Positives = 141/210 (67%), Gaps = 28/210 (13%)

Query: 157 INGAGINSSFAVHQDVDGRAADVALGWSVALGSPFTFATTLEQEYKSDIFGERG--ILLG 214
           ING GINSSF VHQDVDGRA DVAL WSVALGSPFTFAT+LE EY+S IF ERG  ILL 
Sbjct: 1   INGVGINSSFLVHQDVDGRATDVALVWSVALGSPFTFATSLEMEYRSHIFRERGKSILLR 60

Query: 215 AVHGVVECLFRRYTENGMNEDVAYKNTVEXXXXXXXXXXXXXXMLAVYNSLSDEGKRDFE 274
           AVHG+VE LFRRYTENGM+ED+AY NTVE                 +   +S +G  +FE
Sbjct: 61  AVHGIVESLFRRYTENGMSEDLAYNNTVEPITR------------TISKIISTKGM-EFE 107

Query: 275 TAYSAAYYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVG 334
            AYSA+YY CMDILY CYED+A+ S+IRSVVL GR FY       FP         W   
Sbjct: 108 KAYSASYYSCMDILYACYEDIAARSDIRSVVLDGRNFYRYVRCLHFP---------WL-- 156

Query: 335 ERVRATRPKDDLGPLYPFTAGVFVALMMAQ 364
             VR+TRP  DLGPLYPF   V+V LM AQ
Sbjct: 157 --VRSTRPAGDLGPLYPFIVRVYVELMKAQ 184


>Glyma07g28950.1 
          Length = 73

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 44/72 (61%), Positives = 46/72 (63%)

Query: 95  ADNYEKIFSHMKPNSIXXXXXXXXXXXXXXXXXDFPKNISVIAVCPKGMGPSVRRLYVQG 154
           ADNYEKI S+MKPN I                 DFPK+ SVI VCPK MG SVRR YVQG
Sbjct: 1   ADNYEKICSYMKPNRIPGLSHGFLLGHLQSMGLDFPKHFSVIIVCPKSMGLSVRRPYVQG 60

Query: 155 KEINGAGINSSF 166
           KEING  INSSF
Sbjct: 61  KEINGVVINSSF 72


>Glyma15g22080.1 
          Length = 49

 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 40/49 (81%)

Query: 46 LQIGLRKGSRSFAEARAAGFTEESGTLGDIWETIAGSDLVLLLISDAAQ 94
          ++IGL+KGS SF EAR AGFTEE+G L DI ++I  SD+VLL ISDAA+
Sbjct: 1  MEIGLKKGSPSFNEARGAGFTEENGILADICQSILSSDVVLLFISDAAE 49


>Glyma18g42720.1 
          Length = 177

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/35 (68%), Positives = 31/35 (88%)

Query: 62  AAGFTEESGTLGDIWETIAGSDLVLLLISDAAQAD 96
           AAGF+EE+GTLGDIWET++ SD V+LLISD+ Q +
Sbjct: 82  AAGFSEENGTLGDIWETVSVSDPVILLISDSTQIE 116