Jatropha Genome Database

JcCB0892281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0892281.10 - phase: 0 /pseudo/partial
         (80 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g25050.1                                                        91   2e-19

>Glyma08g25050.1 
          Length = 508

 Score = 91.3 bits (225), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/65 (64%), Positives = 49/65 (75%)

Query: 4   SCKYGATCRYNHPDRNAINPPAAAISHPIVANPAANLNIGVINPAASLYQTIDPRLAQPM 63
           SCKYG TCRYNHPDRNAINPP A +   I  + AANLNIG++NPA S+YQ  +PRL+ PM
Sbjct: 328 SCKYGVTCRYNHPDRNAINPPIAGLGASIFPSSAANLNIGLLNPAVSVYQAFEPRLSNPM 387

Query: 64  VWVNI 68
             V I
Sbjct: 388 SQVGI 392