Jatropha Genome Database

JcCB0843131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0843131.10 - phase: 0 /partial
         (230 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03120.1                                                       436   e-123
Glyma13g42270.1                                                       436   e-123
Glyma17g05980.1                                                       418   e-117

>Glyma15g03120.1 
          Length = 519

 Score =  436 bits (1122), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 206/230 (89%), Positives = 223/230 (96%)

Query: 1   KISMAQLVQPIANGAFVLSVDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIE 60
           KIS+AQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIE
Sbjct: 253 KISLAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIE 312

Query: 61  ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFYMCKELGLVDRIPRLVCAQAANANPLYLHY 120
           ILQQFDW+VPDWVIVPGGNLGNIYAFYKGF MC+ELGLVD+IPRLVCAQAANA+PLYL++
Sbjct: 313 ILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDKIPRLVCAQAANADPLYLYF 372

Query: 121 KSGWKDFKSIKANNTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADST 180
           KSGWK+FK +K++ TFASAIQIGDPVSIDRAV+ALK+ +GIVEEATEEELMDA AQADST
Sbjct: 373 KSGWKEFKPVKSSTTFASAIQIGDPVSIDRAVHALKSCDGIVEEATEEELMDATAQADST 432

Query: 181 GMFICPHTGVALTALIKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIEYHS 230
           GMFICPHTGVALTAL KLRNSGVIK TDRTVVVSTAHGLKFTQSKI+YHS
Sbjct: 433 GMFICPHTGVALTALFKLRNSGVIKATDRTVVVSTAHGLKFTQSKIDYHS 482


>Glyma13g42270.1 
          Length = 511

 Score =  436 bits (1121), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 205/230 (89%), Positives = 223/230 (96%)

Query: 1   KISMAQLVQPIANGAFVLSVDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIE 60
           KIS+AQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIE
Sbjct: 245 KISLAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIE 304

Query: 61  ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFYMCKELGLVDRIPRLVCAQAANANPLYLHY 120
           ILQQFDW+VPDWVIVPGGNLGNIYAFYKGF MC+ELGLVD+IPRLVCAQAANA+PLYL++
Sbjct: 305 ILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDKIPRLVCAQAANADPLYLYF 364

Query: 121 KSGWKDFKSIKANNTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADST 180
           KSGWK+FK +K++ TFASAIQIGDPVSIDRAV+ALK+ +GIVEEATEEELMDA AQADST
Sbjct: 365 KSGWKEFKPVKSSTTFASAIQIGDPVSIDRAVHALKSCDGIVEEATEEELMDATAQADST 424

Query: 181 GMFICPHTGVALTALIKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIEYHS 230
           GMFICPHTGVALTAL KLRNSG+IK TDRTVVVSTAHGLKFTQSKI+YHS
Sbjct: 425 GMFICPHTGVALTALFKLRNSGLIKATDRTVVVSTAHGLKFTQSKIDYHS 474


>Glyma17g05980.1 
          Length = 533

 Score =  418 bits (1075), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 197/230 (85%), Positives = 215/230 (93%)

Query: 1   KISMAQLVQPIANGAFVLSVDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIE 60
           KIS AQL+QP++NG+ VLS++TDFDGCM+LIREITAELPIYLANSLNSLRLEGQKTAAIE
Sbjct: 263 KISTAQLIQPVSNGSLVLSINTDFDGCMKLIREITAELPIYLANSLNSLRLEGQKTAAIE 322

Query: 61  ILQQFDWEVPDWVIVPGGNLGNIYAFYKGFYMCKELGLVDRIPRLVCAQAANANPLYLHY 120
           ILQQF+WEVPDWVIVPGGNLGNIYAFYKGF MCKELGLV+RIPRLVCAQAANANPLYLHY
Sbjct: 323 ILQQFNWEVPDWVIVPGGNLGNIYAFYKGFKMCKELGLVERIPRLVCAQAANANPLYLHY 382

Query: 121 KSGWKDFKSIKANNTFASAIQIGDPVSIDRAVYALKNSNGIVEEATEEELMDAMAQADST 180
           K+G+KDF ++KA  TFASAIQIGDPVSIDRAV+AL+N+ GIVEEATEEELMDAM QADST
Sbjct: 383 KNGFKDFNAVKAETTFASAIQIGDPVSIDRAVHALRNTEGIVEEATEEELMDAMVQADST 442

Query: 181 GMFICPHTGVALTALIKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIEYHS 230
           GMFICPHTGVAL ALIKLRN GVI   +R VVVSTAHGLKF QSKI+YHS
Sbjct: 443 GMFICPHTGVALAALIKLRNRGVIGAGERVVVVSTAHGLKFAQSKIDYHS 492