Jatropha Genome Database

JcCB0832121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0832121.10 - phase: 0 /pseudo
         (125 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g30090.1                                                        86   9e-18

>Glyma07g30090.1 
          Length = 408

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 47/62 (75%)

Query: 23 GSICGYDSLHHLLCANLKPHLFKEVSRLLLGMNCGKAIETLVLPDSAKVISSKHDFDLQV 82
           S CGYDSLH LL  NL PH F+EVSRLL G+NCGKA+E + LP+SA  +S++H FD+Q 
Sbjct: 15 ASFCGYDSLHRLLKDNLNPHHFQEVSRLLTGLNCGKALEAVSLPESATSLSAEHGFDIQA 74

Query: 83 VA 84
           +
Sbjct: 75 FS 76