Jatropha Genome Database

JcCB0827591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0827591.10 - phase: 0 
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04320.3                                                       219   5e-58
Glyma02g04320.2                                                       219   5e-58
Glyma02g04320.1                                                       219   5e-58
Glyma01g03260.3                                                       218   1e-57
Glyma01g03260.2                                                       218   1e-57
Glyma01g03260.1                                                       218   1e-57
Glyma16g01630.2                                                       124   3e-29
Glyma16g01630.3                                                       123   4e-29
Glyma16g01630.1                                                       123   4e-29
Glyma07g05130.1                                                       112   7e-26

>Glyma02g04320.3 
          Length = 481

 Score =  219 bits (558), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 101/112 (90%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+ GKVPDV+YCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAGKVPDVYYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQKEGVFHLRTTILPAEE+MP IM SFKKFNDEFMEQYED  GYSR+
Sbjct: 430 PGSGFGQKEGVFHLRTTILPAEEDMPDIMDSFKKFNDEFMEQYEDDRGYSRL 481


>Glyma02g04320.2 
          Length = 481

 Score =  219 bits (558), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 101/112 (90%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+ GKVPDV+YCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAGKVPDVYYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQKEGVFHLRTTILPAEE+MP IM SFKKFNDEFMEQYED  GYSR+
Sbjct: 430 PGSGFGQKEGVFHLRTTILPAEEDMPDIMDSFKKFNDEFMEQYEDDRGYSRL 481


>Glyma02g04320.1 
          Length = 481

 Score =  219 bits (558), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 101/112 (90%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+ GKVPDV+YCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAGKVPDVYYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQKEGVFHLRTTILPAEE+MP IM SFKKFNDEFMEQYED  GYSR+
Sbjct: 430 PGSGFGQKEGVFHLRTTILPAEEDMPDIMDSFKKFNDEFMEQYEDDRGYSRL 481


>Glyma01g03260.3 
          Length = 481

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+  KVPDVFYCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAAKVPDVFYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQ+EGVFHLRTTILP EE+MPAIM SFKKFNDEFMEQYED+ GYSR+
Sbjct: 430 PGSGFGQREGVFHLRTTILPDEEDMPAIMDSFKKFNDEFMEQYEDNRGYSRL 481


>Glyma01g03260.2 
          Length = 481

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+  KVPDVFYCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAAKVPDVFYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQ+EGVFHLRTTILP EE+MPAIM SFKKFNDEFMEQYED+ GYSR+
Sbjct: 430 PGSGFGQREGVFHLRTTILPDEEDMPAIMDSFKKFNDEFMEQYEDNRGYSRL 481


>Glyma01g03260.1 
          Length = 481

 Score =  218 bits (554), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 107/112 (95%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           MTDGFNSCRNVVCNFTEGAMYSFPQIRLPP+A+EAAK+  KVPDVFYCLKLLEATGISTV
Sbjct: 370 MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPRALEAAKQAAKVPDVFYCLKLLEATGISTV 429

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYEDHTGYSRM 112
           PGSGFGQ+EGVFHLRTTILP EE+MPAIM SFKKFNDEFMEQYED+ GYSR+
Sbjct: 430 PGSGFGQREGVFHLRTTILPDEEDMPAIMDSFKKFNDEFMEQYEDNRGYSRL 481


>Glyma16g01630.2 
          Length = 421

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 72/105 (68%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           + D FN    V CN  EGAMY FPQIRL  KAI+AA      PD FYC +LL ATG+  V
Sbjct: 317 LEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDANTAPDNFYCKRLLNATGVVVV 376

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYED 105
           PGSGFGQ  G +H R TILP EE++PAI++   +F+++FM+++ D
Sbjct: 377 PGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD 421


>Glyma16g01630.3 
          Length = 526

 Score =  123 bits (309), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 72/105 (68%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           + D FN    V CN  EGAMY FPQIRL  KAI+AA      PD FYC +LL ATG+  V
Sbjct: 422 LEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDANTAPDNFYCKRLLNATGVVVV 481

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYED 105
           PGSGFGQ  G +H R TILP EE++PAI++   +F+++FM+++ D
Sbjct: 482 PGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD 526


>Glyma16g01630.1 
          Length = 536

 Score =  123 bits (308), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 72/105 (68%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           + D FN    V CN  EGAMY FPQIRL  KAI+AA      PD FYC +LL ATG+  V
Sbjct: 432 LEDAFNKLEGVTCNKAEGAMYLFPQIRLSQKAIKAAGDANTAPDNFYCKRLLNATGVVVV 491

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYED 105
           PGSGFGQ  G +H R TILP EE++PAI++   +F+++FM+++ D
Sbjct: 492 PGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD 536


>Glyma07g05130.1 
          Length = 541

 Score =  112 bits (281), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 56/105 (53%), Positives = 73/105 (69%)

Query: 1   MTDGFNSCRNVVCNFTEGAMYSFPQIRLPPKAIEAAKRLGKVPDVFYCLKLLEATGISTV 60
           + D FN    V CN  EGAMY FPQIRL  KAI+AA+     PD FYC +LL ATG+  V
Sbjct: 437 LEDAFNKLEGVTCNKAEGAMYLFPQIRLSEKAIKAAEAANATPDNFYCKRLLNATGVVVV 496

Query: 61  PGSGFGQKEGVFHLRTTILPAEEEMPAIMSSFKKFNDEFMEQYED 105
           PGSGFGQ  G +H R TILP EE++PAI++   +F+++FM+++ D
Sbjct: 497 PGSGFGQVPGTWHFRCTILPPEEKIPAIVTRLTEFHEKFMDEFRD 541