Jatropha Genome Database

JcCB0824821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0824821.10 - phase: 2 /partial
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g21590.2                                                       178   2e-45
Glyma16g21590.1                                                       178   2e-45
Glyma09g32870.2                                                       177   3e-45
Glyma09g32870.1                                                       177   3e-45

>Glyma16g21590.2 
          Length = 627

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 97/117 (82%)

Query: 19  LVDWCLEYCKTQDGHMNPKAHRVFYSGCQAIMYVLCFRMRSIMDVPGLKSHLLLKPMELI 78
           LVDWC  YCK +D  MNP+AH+VFYSGCQAIMY+LCFRMRS+MD+P LK  LL  PME I
Sbjct: 397 LVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAI 456

Query: 79  LKHKLDPLKVCLPSIVEEFLKQAKAAHLFTTPETFISEDLLESEFSREFGGLERLDM 135
           LKHKL PLKVCLP++V EFL+QAKAA LF   E+F+ +D+LES+ S+ FGG++RLDM
Sbjct: 457 LKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDM 513


>Glyma16g21590.1 
          Length = 627

 Score =  178 bits (451), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 97/117 (82%)

Query: 19  LVDWCLEYCKTQDGHMNPKAHRVFYSGCQAIMYVLCFRMRSIMDVPGLKSHLLLKPMELI 78
           LVDWC  YCK +D  MNP+AH+VFYSGCQAIMY+LCFRMRS+MD+P LK  LL  PME I
Sbjct: 397 LVDWCYAYCKLRDFDMNPRAHQVFYSGCQAIMYILCFRMRSLMDIPRLKLQLLNMPMEAI 456

Query: 79  LKHKLDPLKVCLPSIVEEFLKQAKAAHLFTTPETFISEDLLESEFSREFGGLERLDM 135
           LKHKL PLKVCLP++V EFL+QAKAA LF   E+F+ +D+LES+ S+ FGG++RLDM
Sbjct: 457 LKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGIDRLDM 513


>Glyma09g32870.2 
          Length = 634

 Score =  177 bits (449), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 97/117 (82%)

Query: 19  LVDWCLEYCKTQDGHMNPKAHRVFYSGCQAIMYVLCFRMRSIMDVPGLKSHLLLKPMELI 78
           LVDWC  YCK +D  MNP+AH+VFYSGCQAIMY++CFRMRS+MDVP LK  LL  PME I
Sbjct: 403 LVDWCYAYCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAI 462

Query: 79  LKHKLDPLKVCLPSIVEEFLKQAKAAHLFTTPETFISEDLLESEFSREFGGLERLDM 135
           LKHKL PLKVCLP++V EFL+QAKAA LF   E+F+ +D+LES+ S+ FGG++RLDM
Sbjct: 463 LKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGMDRLDM 519


>Glyma09g32870.1 
          Length = 634

 Score =  177 bits (449), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 80/117 (68%), Positives = 97/117 (82%)

Query: 19  LVDWCLEYCKTQDGHMNPKAHRVFYSGCQAIMYVLCFRMRSIMDVPGLKSHLLLKPMELI 78
           LVDWC  YCK +D  MNP+AH+VFYSGCQAIMY++CFRMRS+MDVP LK  LL  PME I
Sbjct: 403 LVDWCYAYCKFRDFDMNPRAHQVFYSGCQAIMYIMCFRMRSLMDVPRLKLQLLNMPMEAI 462

Query: 79  LKHKLDPLKVCLPSIVEEFLKQAKAAHLFTTPETFISEDLLESEFSREFGGLERLDM 135
           LKHKL PLKVCLP++V EFL+QAKAA LF   E+F+ +D+LES+ S+ FGG++RLDM
Sbjct: 463 LKHKLSPLKVCLPTVVVEFLRQAKAAQLFMASESFVFDDMLESDLSKAFGGMDRLDM 519