Jatropha Genome Database

JcCB0819391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0819391.10 - phase: 1 /partial
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g01950.1                                                       105   3e-23

>Glyma04g01950.1 
          Length = 737

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 48/66 (72%), Positives = 56/66 (84%)

Query: 17  KEGHEAEHFTSPEGIPGVAETNFNNRPNSFKVLSPARTCVAYYRVDESQEINNGGNLGAV 76
           + GH+ +HFTSPEGIPGV ETNFNNRPNSFKVLSPARTCVAYYRV+ESQE ++  +L  V
Sbjct: 596 RVGHDVDHFTSPEGIPGVPETNFNNRPNSFKVLSPARTCVAYYRVEESQEDDDNNSLVGV 655

Query: 77  DETLTA 82
           +ET  A
Sbjct: 656 EETSAA 661