Jatropha Genome Database

JcCB0813871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0813871.10 + phase: 0 
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g43050.2                                                       115   3e-26
Glyma13g43050.1                                                       115   3e-26
Glyma15g02350.2                                                        99   2e-21
Glyma15g02350.1                                                        99   2e-21
Glyma08g21460.1                                                        55   4e-08
Glyma07g01800.1                                                        53   3e-07

>Glyma13g43050.2 
          Length = 346

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/166 (46%), Positives = 104/166 (62%), Gaps = 18/166 (10%)

Query: 9   EACPQLLDLIPREREW-LVKRADERSTEEKKLELRLGPPGEEWSLGKTAKNSDDRVRDEF 67
           EA PQLLDLI  EREW + KR + +S+EE+KLELRLGPPGE+WSLG   KN++    D+ 
Sbjct: 8   EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNNNTEREDQS 67

Query: 68  LLSLGNQQTHKFSSPENTRAGSVWFNQ----QLSQQAKAATPFLQFPPKTVTTTQQSLPV 123
           LLSLG    +  S+   ++A   W N     Q + +  +++ FLQFP    ++TQ   PV
Sbjct: 68  LLSLGCFSPNINSNAFQSKASHPWPNYHHHGQGNNKKASSSSFLQFP----SSTQ---PV 120

Query: 124 -TGKESSLPCCTKVVVDLQQSAEKKGFSQPTPANTAV--PNSSQKR 166
             GK++S   C KVVV+LQQ+        P+ ANTAV  PN+SQKR
Sbjct: 121 MMGKDAS---CPKVVVELQQNGGDGKVFSPSSANTAVSQPNTSQKR 163


>Glyma13g43050.1 
          Length = 346

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/166 (46%), Positives = 104/166 (62%), Gaps = 18/166 (10%)

Query: 9   EACPQLLDLIPREREW-LVKRADERSTEEKKLELRLGPPGEEWSLGKTAKNSDDRVRDEF 67
           EA PQLLDLI  EREW + KR + +S+EE+KLELRLGPPGE+WSLG   KN++    D+ 
Sbjct: 8   EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNNNTEREDQS 67

Query: 68  LLSLGNQQTHKFSSPENTRAGSVWFNQ----QLSQQAKAATPFLQFPPKTVTTTQQSLPV 123
           LLSLG    +  S+   ++A   W N     Q + +  +++ FLQFP    ++TQ   PV
Sbjct: 68  LLSLGCFSPNINSNAFQSKASHPWPNYHHHGQGNNKKASSSSFLQFP----SSTQ---PV 120

Query: 124 -TGKESSLPCCTKVVVDLQQSAEKKGFSQPTPANTAV--PNSSQKR 166
             GK++S   C KVVV+LQQ+        P+ ANTAV  PN+SQKR
Sbjct: 121 MMGKDAS---CPKVVVELQQNGGDGKVFSPSSANTAVSQPNTSQKR 163


>Glyma15g02350.2 
          Length = 320

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 95/175 (54%), Gaps = 44/175 (25%)

Query: 1   MEGGSKNGEACPQLLDLIPREREW-LVKRADERSTEEKKLELRLGPPGEEWSLGKTAKNS 59
           M+  S+N EA PQLLDLI  EREW + KR + +S+EE+KLELRLGPPGE+WSLG   KN+
Sbjct: 1   MDERSRN-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNT 59

Query: 60  DDRVRDEFLLSLGNQQTHKFSSPENT--RAGSVWFNQQLSQQAK----AATPFLQFPPKT 113
           +   R+E LLSLG        SP N      S W N     Q      +++ FLQ     
Sbjct: 60  E---REESLLSLG------CFSPNNGFQSKASPWPNYHHHHQGNNNKASSSSFLQ----- 105

Query: 114 VTTTQQSLPVTGKESSLPCCTKVVVDLQQSAEKKGFSQPTPANTAV--PNSSQKR 166
                              C KVVV+LQ   + K FS P+ ANTAV  PN+SQKR
Sbjct: 106 -------------------CPKVVVELQNGGDGKVFS-PSSANTAVSQPNTSQKR 140


>Glyma15g02350.1 
          Length = 320

 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 95/175 (54%), Gaps = 44/175 (25%)

Query: 1   MEGGSKNGEACPQLLDLIPREREW-LVKRADERSTEEKKLELRLGPPGEEWSLGKTAKNS 59
           M+  S+N EA PQLLDLI  EREW + KR + +S+EE+KLELRLGPPGE+WSLG   KN+
Sbjct: 1   MDERSRN-EASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNT 59

Query: 60  DDRVRDEFLLSLGNQQTHKFSSPENT--RAGSVWFNQQLSQQAK----AATPFLQFPPKT 113
           +   R+E LLSLG        SP N      S W N     Q      +++ FLQ     
Sbjct: 60  E---REESLLSLG------CFSPNNGFQSKASPWPNYHHHHQGNNNKASSSSFLQ----- 105

Query: 114 VTTTQQSLPVTGKESSLPCCTKVVVDLQQSAEKKGFSQPTPANTAV--PNSSQKR 166
                              C KVVV+LQ   + K FS P+ ANTAV  PN+SQKR
Sbjct: 106 -------------------CPKVVVELQNGGDGKVFS-PSSANTAVSQPNTSQKR 140


>Glyma08g21460.1 
          Length = 313

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 28/138 (20%)

Query: 31  ERSTEEKKLELRLGPPGEEWSLGKTAKNSDDRVRDEFLLSLGNQQTHKF-----SSPENT 85
            +S+EE+KLELRLGPPGEE SL ++ + S +R R+E   +LG   T  F       P  T
Sbjct: 6   HKSSEERKLELRLGPPGEE-SLNESIRKS-NRERNESQFTLGCFSTQNFFTSDKQGPGGT 63

Query: 86  RAGSVW----FNQQLSQQAKAATPFLQFPPKTVTTTQQSLPVTGKESSLPCCTKVVVDLQ 141
              S W    ++ Q   +AKA++ FLQ     + ++ Q++ V GK+ S   C        
Sbjct: 64  TLPSAWPSTSYHHQHQAKAKASS-FLQ-----LQSSPQNMIVMGKDVSQFSCV------- 110

Query: 142 QSAEKKGFSQPTPANTAV 159
              EKK FS P+ AN AV
Sbjct: 111 ---EKKVFS-PSCANPAV 124


>Glyma07g01800.1 
          Length = 317

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 76/138 (55%), Gaps = 28/138 (20%)

Query: 32  RSTEEKKLELRLGPPGEEWSLGKTAKNSD-DRVRDEFLLSLGNQQTHK-FSS----PENT 85
           +S+EE+KLELRLGPPGEE SL ++ +  + +R R+E  L+LG   T K F+S    P   
Sbjct: 7   KSSEERKLELRLGPPGEE-SLNESIRKCNRERRRNESPLTLGCFSTQKIFTSDTPGPGGA 65

Query: 86  RAGSVW----FNQQLSQQAKAATPFLQFPPKTVTTTQQSLPVTGKESSLPCCTKVVVDLQ 141
              S W    ++ Q   +AKA++ FLQ     + ++ Q++ + GK+ S   C        
Sbjct: 66  MLPSAWPSTSYHHQDQAKAKASS-FLQ-----LQSSPQNMILMGKDVSQFSCV------- 112

Query: 142 QSAEKKGFSQPTPANTAV 159
              EKK FS P+ AN AV
Sbjct: 113 ---EKKSFS-PSCANPAV 126