Jatropha Genome Database

JcCB0781371.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0781371.10 + phase: 0 /pseudo/partial
         (87 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g04990.1                                                       135   7e-33

>Glyma17g04990.1 
          Length = 784

 Score =  135 bits (341), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query: 1   ELEKSLKATCEEFIMSVTKLIVDPMLSFATKVTAVKVALSSGSQNQKVESIMAKPLKDQA 60
           ELEKSLKATCEEFIMSVTKL+VDP+LSF TKVTAVKVALSSG QNQK+ES+MAKPLKDQA
Sbjct: 636 ELEKSLKATCEEFIMSVTKLVVDPLLSFVTKVTAVKVALSSGGQNQKLESVMAKPLKDQA 695

Query: 61  FASPEKVAELVQKV 74
           FA+P+KVAELVQKV
Sbjct: 696 FATPDKVAELVQKV 709