Jatropha Genome Database

JcCB0778081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0778081.10 - phase: 0 /partial
         (74 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06590.1                                                       110   5e-25
Glyma13g20790.1                                                       109   6e-25
Glyma11g08920.1                                                        75   2e-14
Glyma02g04780.1                                                        70   7e-13
Glyma16g22640.1                                                        70   7e-13
Glyma14g00500.1                                                        66   1e-11

>Glyma10g06590.1 
          Length = 359

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 59/67 (88%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           +  +N+ANPTALLLS VTMLRHL+LHDKA++IQ AIL TIAEGKYRTADLGG S TT+FT
Sbjct: 293 IAGKNLANPTALLLSGVTMLRHLDLHDKAEQIQKAILNTIAEGKYRTADLGGSSKTTEFT 352

Query: 68  KAICDHL 74
           KAI DHL
Sbjct: 353 KAIIDHL 359


>Glyma13g20790.1 
          Length = 361

 Score =  109 bits (273), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 52/64 (81%), Positives = 57/64 (89%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           +N+ANPTALLLS VTMLRHL LHDKA++IQ AIL TIAEGKYRTADLGG S TT+FTKAI
Sbjct: 298 KNLANPTALLLSGVTMLRHLNLHDKAEQIQKAILNTIAEGKYRTADLGGSSKTTEFTKAI 357

Query: 71  CDHL 74
            DHL
Sbjct: 358 IDHL 361


>Glyma11g08920.1 
          Length = 364

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/67 (55%), Positives = 45/67 (67%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           VV Q  ANP ALLLS+  MLRHL+    ADR++ A+ K I EGKYRT DLGG S+T +  
Sbjct: 297 VVEQQKANPVALLLSSAMMLRHLQFPAFADRLETAVKKVILEGKYRTKDLGGTSTTQEVV 356

Query: 68  KAICDHL 74
            A+ D L
Sbjct: 357 DAVIDAL 363


>Glyma02g04780.1 
          Length = 364

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/64 (53%), Positives = 42/64 (65%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           Q  ANP ALLLS+  MLRHL+    ADR++ A+ K I EGK RT DLGG S+T +   A+
Sbjct: 300 QKKANPVALLLSSAMMLRHLQFPAFADRLETAVEKVILEGKCRTKDLGGTSTTQEVVDAV 359

Query: 71  CDHL 74
            D L
Sbjct: 360 IDAL 363


>Glyma16g22640.1 
          Length = 363

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/64 (53%), Positives = 42/64 (65%)

Query: 11  QNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFTKAI 70
           Q  ANP ALLLS+  MLRHL+    ADR++ A+ K I EGK RT DLGG S+T +   A+
Sbjct: 299 QKKANPVALLLSSAMMLRHLQFPAFADRLETAVEKVILEGKCRTKDLGGTSTTQEVVDAV 358

Query: 71  CDHL 74
            D L
Sbjct: 359 IDAL 362


>Glyma14g00500.1 
          Length = 366

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/67 (47%), Positives = 43/67 (64%)

Query: 8   VVCQNMANPTALLLSAVTMLRHLELHDKADRIQNAILKTIAEGKYRTADLGGKSSTTDFT 67
           +V Q  ANP ALLLS+  MLRHL+    ADR++ A+ + I+EG  RT DLGG S+T    
Sbjct: 299 MVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGNCRTKDLGGDSTTQQVV 358

Query: 68  KAICDHL 74
            A+  +L
Sbjct: 359 DAVIANL 365