Jatropha Genome Database

JcCB0770041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0770041.10 + phase: 1 /partial
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g29630.1                                                       229   1e-60
Glyma20g01220.1                                                       226   9e-60
Glyma15g21180.1                                                       122   1e-28
Glyma09g23550.1                                                        72   2e-13
Glyma12g23130.1                                                        70   7e-13

>Glyma07g29630.1 
          Length = 391

 Score =  229 bits (583), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/142 (76%), Positives = 123/142 (86%), Gaps = 8/142 (5%)

Query: 1   PEIEQGLSDVAHSKVTVSFTPHLMPMVTVLHLCMSRGMQSTIYVEMASGVTTEDLYQQLK 60
           PEIEQGL+D + SKVTVSFTPHL+PM        SRGMQSTIYVEMA GV  EDLYQQLK
Sbjct: 258 PEIEQGLADASGSKVTVSFTPHLIPM--------SRGMQSTIYVEMAPGVRIEDLYQQLK 309

Query: 61  VSYENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRAIIISVIDNLIKGASGQAL 120
           +SYENEEF+ +LE GV+PRTH V+G+N+C +NVFPDRIPGRAIIISVIDNL+KGASGQAL
Sbjct: 310 LSYENEEFVFVLENGVIPRTHSVKGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQAL 369

Query: 121 QNLNIMMGFPENTGLHNLPLFP 142
           QNLN++MGFPEN GLH LPLFP
Sbjct: 370 QNLNLLMGFPENLGLHYLPLFP 391


>Glyma20g01220.1 
          Length = 391

 Score =  226 bits (575), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 122/142 (85%), Gaps = 8/142 (5%)

Query: 1   PEIEQGLSDVAHSKVTVSFTPHLMPMVTVLHLCMSRGMQSTIYVEMASGVTTEDLYQQLK 60
           PEIEQGL+D + SKVTVSFTPHL+PM        SRGMQSTIYVEMA GV  EDLYQQLK
Sbjct: 258 PEIEQGLADASGSKVTVSFTPHLIPM--------SRGMQSTIYVEMAPGVRIEDLYQQLK 309

Query: 61  VSYENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRAIIISVIDNLIKGASGQAL 120
           +SYE+EEF+ +LE G +PRTH V+G+N+C +NVFPDRIPGRAIIISVIDNL+KGASGQAL
Sbjct: 310 LSYEDEEFVVVLENGAIPRTHSVKGTNYCLINVFPDRIPGRAIIISVIDNLVKGASGQAL 369

Query: 121 QNLNIMMGFPENTGLHNLPLFP 142
           QNLN++MGFPEN GLH LPLFP
Sbjct: 370 QNLNLLMGFPENLGLHYLPLFP 391


>Glyma15g21180.1 
          Length = 181

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 54/80 (67%), Positives = 69/80 (86%)

Query: 63  YENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRAIIISVIDNLIKGASGQALQN 122
           + +EEF+ +LE G +P+TH V+ +N+  +NVF D+IPGRAIIISVIDNL+KGASGQALQN
Sbjct: 102 WNDEEFVVMLENGAIPQTHSVKRTNYGLINVFLDQIPGRAIIISVIDNLVKGASGQALQN 161

Query: 123 LNIMMGFPENTGLHNLPLFP 142
           LN++MGFP+N GLH LPLFP
Sbjct: 162 LNLLMGFPKNLGLHYLPLFP 181


>Glyma09g23550.1 
          Length = 210

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 41/47 (87%)

Query: 61  VSYENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRAIIISV 107
           +++ +EEF+ +LE G +PRTH V+G+N+C +NVFP+RIPGRAIIISV
Sbjct: 164 LNFLDEEFVVVLENGAIPRTHRVKGTNYCLINVFPNRIPGRAIIISV 210


>Glyma12g23130.1 
          Length = 78

 Score = 70.1 bits (170), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)

Query: 44  VEMASGVTTED-LYQQLKVSYENEEFIKLLEKGVVPRTHDVRGSNFCYLNVFPDRIPGRA 102
           V    G+   D  +  L   + +EEF+ +LE  V+PRTH+++ +N+C +NVFPDRIPGRA
Sbjct: 12  VSWGCGMCYRDSWFISLLAYFLDEEFVFVLENSVIPRTHNIKRTNYCLINVFPDRIPGRA 71

Query: 103 IIISVI 108
           III ++
Sbjct: 72  IIIFIV 77