Jatropha Genome Database

JcCB0765881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0765881.10 - phase: 2 /pseudo/partial
         (116 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g22240.1                                                       131   2e-31
Glyma06g39770.1                                                       127   3e-30

>Glyma12g22240.1 
          Length = 793

 Score =  131 bits (329), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/65 (87%), Positives = 63/65 (96%)

Query: 25  QTEMTTAERELDQNFNFDWNRIQESGEELEPIFGPGYTGLVNLGNSCYMAATMQVVFSTR 84
           +TEMTTAERELDQN NFDWNRIQESG+E++PIFGPGYTGLVN+GNSCYMAATMQVVFSTR
Sbjct: 276 KTEMTTAERELDQNTNFDWNRIQESGQEVDPIFGPGYTGLVNIGNSCYMAATMQVVFSTR 335

Query: 85  SFCTR 89
           SF +R
Sbjct: 336 SFTSR 340


>Glyma06g39770.1 
          Length = 789

 Score =  127 bits (318), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/65 (84%), Positives = 62/65 (95%)

Query: 25  QTEMTTAERELDQNFNFDWNRIQESGEELEPIFGPGYTGLVNLGNSCYMAATMQVVFSTR 84
           +TEMTTAERELD N NFDWNRIQESG+E++PIFGPGYTGLVN+GNSCYMAAT+QVVFSTR
Sbjct: 271 KTEMTTAERELDHNTNFDWNRIQESGQEVDPIFGPGYTGLVNIGNSCYMAATIQVVFSTR 330

Query: 85  SFCTR 89
           SF +R
Sbjct: 331 SFTSR 335