Jatropha Genome Database

JcCB0763251.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0763251.10 + phase: 0 /partial
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g02290.1                                                       218   5e-57
Glyma04g02230.1                                                       212   2e-55

>Glyma06g02290.1 
          Length = 434

 Score =  218 bits (554), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 111/201 (55%), Positives = 144/201 (71%), Gaps = 3/201 (1%)

Query: 7   DANALKSCSLKVISEANRLKGQQV--FQIEKGSLDSLTQSI-SDNQEEAEPFYLIDLGVV 63
           +A   +  SLK I  A+ +KG++V     E  +L    Q+I +D  +   PF ++DLGVV
Sbjct: 10  EAKGAEPLSLKPIFSASGVKGKRVTALSAEANALTDFIQAIIADKPDIDSPFSVLDLGVV 69

Query: 64  IRLMDKWNQSLPNVKPFYAVKCNTEPALLLSLATLGANFDCASQAEIETILGLGVNPDRI 123
           + LMDKW   LP V+PFYAVKCN   +L+ +LA LG++FDCAS+AEIE++L LGV+PDRI
Sbjct: 70  MGLMDKWACKLPTVQPFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRI 129

Query: 124 MYANPCKSVSHIKYAARVGVNLTTFDSKQEVDKIKKWHPKCELLLRLKVPNESSCWRPLG 183
           +YANPCKS SHI+YAA VGVN+TT+DS  EV+KI+  HP CELLLR+K P +S     LG
Sbjct: 130 IYANPCKSESHIRYAASVGVNVTTYDSLDEVEKIRNCHPTCELLLRIKPPQDSGARTSLG 189

Query: 184 NKYGALTEEVASLLQHANQAG 204
            KYGAL EEV  LLQ A++AG
Sbjct: 190 LKYGALPEEVHELLQAAHEAG 210


>Glyma04g02230.1 
          Length = 459

 Score =  212 bits (539), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 105/186 (56%), Positives = 139/186 (74%), Gaps = 3/186 (1%)

Query: 22  ANRLKGQQVFQI---EKGSLDSLTQSISDNQEEAEPFYLIDLGVVIRLMDKWNQSLPNVK 78
           A+ +KG++V  +   + G  D + + I+D  +   PF ++DLGVV+ LMD+W   LP V+
Sbjct: 50  ASGIKGKRVTALSAEKNGLTDFIQRIIADKPDIDTPFSVLDLGVVMGLMDQWACKLPTVQ 109

Query: 79  PFYAVKCNTEPALLLSLATLGANFDCASQAEIETILGLGVNPDRIMYANPCKSVSHIKYA 138
           PFYAVKCN   +L+ +LA LG++FDCAS+AEIE++L LGV+PDRI+YANPCKS SHI+YA
Sbjct: 110 PFYAVKCNPNLSLIGALAALGSSFDCASKAEIESVLSLGVSPDRIIYANPCKSESHIRYA 169

Query: 139 ARVGVNLTTFDSKQEVDKIKKWHPKCELLLRLKVPNESSCWRPLGNKYGALTEEVASLLQ 198
           A VGVN+TT+DS  EV+KI+K HP CELLLR+K P +S     LG KYGAL EEV  LLQ
Sbjct: 170 ASVGVNVTTYDSIDEVEKIRKCHPTCELLLRIKPPQDSGARTSLGLKYGALPEEVDELLQ 229

Query: 199 HANQAG 204
            A++AG
Sbjct: 230 AAHEAG 235