Jatropha Genome Database

JcCB0762681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0762681.10 + phase: 0 /partial
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53590.1                                                       174   1e-44
Glyma08g47920.1                                                       174   1e-44
Glyma06g34290.1                                                        94   4e-20
Glyma12g09250.1                                                        55   2e-08
Glyma11g19220.1                                                        54   3e-08
Glyma14g04770.1                                                        50   6e-07
Glyma02g44080.1                                                        49   8e-07

>Glyma18g53590.1 
          Length = 535

 Score =  174 bits (442), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 92/99 (92%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTG 60
           GAGAFE AAR+YL+NEVKKTV+GRAQLGVEAFADALLVVPKTLAENSGLDTQD I+ALTG
Sbjct: 413 GAGAFEVAARQYLMNEVKKTVQGRAQLGVEAFADALLVVPKTLAENSGLDTQDVIIALTG 472

Query: 61  EHDRDNIVGINLQTGGALDPQMEGIFDNYSVKRQIINSG 99
           EHD+ NIVG++L TG  +DP MEGIFDNYSVKRQIINSG
Sbjct: 473 EHDKGNIVGLSLNTGEPIDPAMEGIFDNYSVKRQIINSG 511


>Glyma08g47920.1 
          Length = 535

 Score =  174 bits (442), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 84/99 (84%), Positives = 92/99 (92%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTG 60
           GAGAFE AAR+YL+NEVKKTV+GRAQLGVEAFADALLVVPKTLAENSGLDTQD I+ALTG
Sbjct: 413 GAGAFEVAARQYLMNEVKKTVQGRAQLGVEAFADALLVVPKTLAENSGLDTQDVIIALTG 472

Query: 61  EHDRDNIVGINLQTGGALDPQMEGIFDNYSVKRQIINSG 99
           EHD+ NIVG++L TG  +DP MEGIFDNYSVKRQIINSG
Sbjct: 473 EHDKGNIVGLSLNTGEPIDPAMEGIFDNYSVKRQIINSG 511


>Glyma06g34290.1 
          Length = 112

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 51/59 (86%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALT 59
           GAGAFE AAR+YL+NEVK  V   AQ+G+EAFADALLVVPKTL ENSGLDTQD I+ALT
Sbjct: 50  GAGAFEVAARQYLMNEVKPKVFHCAQVGLEAFADALLVVPKTLVENSGLDTQDVIIALT 108


>Glyma12g09250.1 
          Length = 527

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 14  INEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTGEHDRDNIV-GINL 72
           ++ + K   G+  L +EAF+ ALL +P  +A+N+GLD+ + I  L  EH ++    GI++
Sbjct: 416 VDALAKKTPGKKSLAIEAFSRALLAIPTIIADNAGLDSAELISQLRAEHQKEGCTAGIDV 475

Query: 73  QTGGALDPQMEGIFDNYSVKRQIINS 98
            +G   D    GI + + VK+ ++ S
Sbjct: 476 ISGSVGDMAERGICEAFKVKQAVLLS 501


>Glyma11g19220.1 
          Length = 527

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 14  INEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTGEHDRDNIV-GINL 72
           ++ + K   G+  L +EAF+ ALL +P  +A+N+GLD+ + I  L  EH ++    GI++
Sbjct: 416 VDALAKKTPGKKSLAIEAFSRALLAIPTIIADNAGLDSAELISQLRAEHQKEGCTSGIDV 475

Query: 73  QTGGALDPQMEGIFDNYSVKRQIINS 98
            +G   D    GI + + VK+ ++ S
Sbjct: 476 ISGSVGDMAERGISEAFKVKQAVLLS 501


>Glyma14g04770.1 
          Length = 560

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTG 60
           G GA +    +YL  +  +T+ G++QL + ++A AL V+P+ L +N+G D  D +  L  
Sbjct: 411 GGGAIDMEISRYL-RQHARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQ 469

Query: 61  EHDRDN----IVGINLQTGGALDPQMEGIFDNYSVKRQIINSG 99
           +H   +      G+++ TGG  D     +++   VK   IN+ 
Sbjct: 470 KHALPSGEGAPYGVDIATGGIADSFANFVWEPAVVKINAINAA 512


>Glyma02g44080.1 
          Length = 560

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 1   GAGAFEFAARKYLINEVKKTVKGRAQLGVEAFADALLVVPKTLAENSGLDTQDEIVALTG 60
           G GA +    +YL  +  +T+ G++QL + ++A AL V+P+ L +N+G D  D +  L  
Sbjct: 411 GGGAIDMEISRYL-RQHARTIAGKSQLFINSYAKALEVIPRQLCDNAGFDATDVLNKLRQ 469

Query: 61  EHDRDN----IVGINLQTGGALDPQMEGIFDNYSVKRQIINSG 99
           +H   +      G+++ TGG  D     +++   VK   IN+ 
Sbjct: 470 KHALPSGEGGPYGVDIATGGIADSFANFVWEPAIVKINAINAA 512