Jatropha Genome Database

JcCB0762671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0762671.10 - phase: 0 /partial
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g43200.2                                                        74   3e-14
Glyma15g43200.1                                                        74   3e-14
Glyma10g11670.2                                                        74   3e-14
Glyma10g11670.1                                                        74   3e-14
Glyma12g01170.1                                                        68   3e-12
Glyma12g01160.1                                                        64   3e-11

>Glyma15g43200.2 
          Length = 340

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 10/61 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEFC 61
           +VIW KDLA  SP+PWYLPLDK+HFS SSFRLTA+GR           F+   VK LE+ 
Sbjct: 245 EVIWEKDLAVDSPLPWYLPLDKSHFSLSSFRLTAVGRL----------FTKNMVKVLEYV 294

Query: 62  G 62
           G
Sbjct: 295 G 295


>Glyma15g43200.1 
          Length = 340

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 10/61 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEFC 61
           +VIW KDLA  SP+PWYLPLDK+HFS SSFRLTA+GR           F+   VK LE+ 
Sbjct: 245 EVIWEKDLAVDSPLPWYLPLDKSHFSLSSFRLTAVGRL----------FTKNMVKVLEYV 294

Query: 62  G 62
           G
Sbjct: 295 G 295


>Glyma10g11670.2 
          Length = 340

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 10/61 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEFC 61
           +VIW KDLA  SP+PWYLPLDK+HFS SSFRLTA+GR           F+   VK LE+ 
Sbjct: 245 EVIWEKDLAVDSPLPWYLPLDKSHFSLSSFRLTAVGRL----------FTKNMVKVLEYV 294

Query: 62  G 62
           G
Sbjct: 295 G 295


>Glyma10g11670.1 
          Length = 340

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 41/61 (67%), Gaps = 10/61 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEFC 61
           +VIW KDLA  SP+PWYLPLDK+HFS SSFRLTA+GR           F+   VK LE+ 
Sbjct: 245 EVIWEKDLAVDSPLPWYLPLDKSHFSLSSFRLTAVGRL----------FTKNMVKVLEYV 294

Query: 62  G 62
           G
Sbjct: 295 G 295


>Glyma12g01170.1 
          Length = 340

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 10/61 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEFC 61
           ++IW KDLA  SPVPWY PLD + FS +SFRLTA+GRF          F+   VK LE+ 
Sbjct: 245 ELIWEKDLAIESPVPWYFPLDTSRFSLTSFRLTAVGRF----------FTRSLVKGLEYV 294

Query: 62  G 62
           G
Sbjct: 295 G 295


>Glyma12g01160.1 
          Length = 340

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 10/59 (16%)

Query: 2   KVIWSKDLATSSPVPWYLPLDKNHFSFSSFRLTALGRFSQKTWYLTGNFSPLQVKALEF 60
           +VIW KDLA +SPVPWY  LD +HFS S+F LT++GRF          F+   ++ALEF
Sbjct: 245 EVIWEKDLAVNSPVPWYFHLDASHFSLSTFPLTSIGRF----------FTRSLIRALEF 293