Jatropha Genome Database

JcCB0760911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0760911.10 - phase: 0 /partial
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g25050.1                                                        84   2e-17
Glyma15g30180.1                                                        77   4e-15
Glyma17g02720.2                                                        52   2e-07
Glyma17g02720.1                                                        52   2e-07
Glyma07g37980.1                                                        50   4e-07

>Glyma08g25050.1 
          Length = 508

 Score = 84.3 bits (207), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 1   FYMKTGECKFGERCKFHHPINRSAPTQAEQQAVKLTLAGLPRRE 44
           FYMKTGECKFGERCK+HHPI+RSAP+ ++Q  VKLT AGLPRRE
Sbjct: 408 FYMKTGECKFGERCKYHHPIDRSAPSLSKQATVKLTPAGLPRRE 451


>Glyma15g30180.1 
          Length = 561

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/44 (75%), Positives = 38/44 (86%)

Query: 1   FYMKTGECKFGERCKFHHPINRSAPTQAEQQAVKLTLAGLPRRE 44
           FYMKTG CKFGERCK+HHPI+RSA + ++Q  VKLT AGLPRRE
Sbjct: 462 FYMKTGVCKFGERCKYHHPIDRSALSLSKQATVKLTPAGLPRRE 505


>Glyma17g02720.2 
          Length = 402

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/43 (53%), Positives = 29/43 (67%), Gaps = 4/43 (9%)

Query: 2   YMKTGECKFGERCKFHHPINRSAPTQAEQQAVKLTLAGLPRRE 44
           YMKTGECKFG  C++HHP ++SAP    +  V L+  GLP R 
Sbjct: 232 YMKTGECKFGLSCRYHHPPDKSAP----KATVTLSPVGLPLRP 270


>Glyma17g02720.1 
          Length = 484

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 4/42 (9%)

Query: 2   YMKTGECKFGERCKFHHPINRSAPTQAEQQAVKLTLAGLPRR 43
           YMKTGECKFG  C++HHP ++SAP    +  V L+  GLP R
Sbjct: 314 YMKTGECKFGLSCRYHHPPDKSAP----KATVTLSPVGLPLR 351


>Glyma07g37980.1 
          Length = 484

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 4/42 (9%)

Query: 2   YMKTGECKFGERCKFHHPINRSAPTQAEQQAVKLTLAGLPRR 43
           YMKTG+CKFG  C++HHP ++SAP    +  V L+  GLP R
Sbjct: 314 YMKTGDCKFGPLCRYHHPPDKSAP----KANVTLSPVGLPLR 351