Jatropha Genome Database

JcCB0756571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0756571.10 + phase: 0 /partial
         (135 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g02480.1                                                       195   1e-50
Glyma09g33490.1                                                       194   2e-50
Glyma11g25890.1                                                        96   1e-20

>Glyma01g02480.1 
          Length = 787

 Score =  195 bits (496), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 93/126 (73%), Positives = 105/126 (83%)

Query: 10  SNPLLQDFEFPPFDVVEAKHVRPGIRAXXXXXXXXXXXXXRTLEPSWPKLVEPFEKIIDQ 69
            NPLLQ+F FPPFDVVE KHVRPGIRA             R++EPSWPKLVEP EKIIDQ
Sbjct: 94  GNPLLQNFVFPPFDVVEPKHVRPGIRALLGKLEHELEELERSVEPSWPKLVEPLEKIIDQ 153

Query: 70  LAVVWGAINHLKSVKDTPELRAAIEEVQPEKVKFELRLGQSKPIYNAFKAIQESPQWQSL 129
           L+VVWG +NHLK+VKD+ ELR+AIE+VQ EKVKF+LRLGQSKPIYNAFKAIQESP WQ+L
Sbjct: 154 LSVVWGMVNHLKAVKDSSELRSAIEDVQAEKVKFQLRLGQSKPIYNAFKAIQESPNWQTL 213

Query: 130 SDAQKR 135
           SDA+KR
Sbjct: 214 SDARKR 219


>Glyma09g33490.1 
          Length = 771

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/132 (69%), Positives = 109/132 (82%)

Query: 4   VDETLGSNPLLQDFEFPPFDVVEAKHVRPGIRAXXXXXXXXXXXXXRTLEPSWPKLVEPF 63
           +++ +  NPLLQ+F+FPPFDV+E KHVRPGIRA             R +EPSWPKLVEP 
Sbjct: 72  LNDAVEGNPLLQNFDFPPFDVLEPKHVRPGIRALLGKLESELEELERNVEPSWPKLVEPL 131

Query: 64  EKIIDQLAVVWGAINHLKSVKDTPELRAAIEEVQPEKVKFELRLGQSKPIYNAFKAIQES 123
           EKI+D+L+VVWG INHLKSVKD+ ELR+AIE+VQ EKVKF+LRLGQSKPIYNAFKAIQES
Sbjct: 132 EKIVDRLSVVWGMINHLKSVKDSSELRSAIEDVQAEKVKFQLRLGQSKPIYNAFKAIQES 191

Query: 124 PQWQSLSDAQKR 135
           P WQ+LSDA+KR
Sbjct: 192 PDWQTLSDARKR 203


>Glyma11g25890.1 
          Length = 299

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/59 (74%), Positives = 51/59 (86%)

Query: 77  INHLKSVKDTPELRAAIEEVQPEKVKFELRLGQSKPIYNAFKAIQESPQWQSLSDAQKR 135
           +NHLK V D+ +LR+ IE+VQ EKVKF+LRLG SKPIYNAFKAIQESP WQ+LSDA KR
Sbjct: 2   VNHLKVVNDSLQLRSTIEDVQTEKVKFQLRLGPSKPIYNAFKAIQESPNWQTLSDACKR 60