Jatropha Genome Database

JcCB0750271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0750271.10 + phase: 1 /partial
         (96 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45120.1                                                       158   1e-39
Glyma18g07550.1                                                       158   1e-39
Glyma13g02460.1                                                       107   3e-24
Glyma05g19680.1                                                        84   3e-17
Glyma14g01310.1                                                        77   5e-15
Glyma18g04590.1                                                        57   4e-09

>Glyma08g45120.1 
          Length = 266

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/104 (74%), Positives = 90/104 (86%), Gaps = 8/104 (7%)

Query: 1   QDKISDFEMKLMDIDSEHLGIPEAEYHAIIRMPSAEFAKICRDLASIGDTVVISVSKEGV 60
           QDKISDFEMKLMDIDSEHLGIPEAEYHAI++MPS+EFA+IC+DL+SIGDTVVISV+KEGV
Sbjct: 108 QDKISDFEMKLMDIDSEHLGIPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISVTKEGV 167

Query: 61  KFSTRGDIGAANVVLRQNTTVDK-----VLSNN---LLSFQLQY 96
           KFST+GDIG AN+V RQNT+VDK     V+  N    L+F L+Y
Sbjct: 168 KFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRY 211


>Glyma18g07550.1 
          Length = 266

 Score =  158 bits (399), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/104 (73%), Positives = 90/104 (86%), Gaps = 8/104 (7%)

Query: 1   QDKISDFEMKLMDIDSEHLGIPEAEYHAIIRMPSAEFAKICRDLASIGDTVVISVSKEGV 60
           QDKISDFEMKLMDIDSEHLGIPEAEYHAI++MPS+EFA+IC+DL+SIGDTVVIS++KEGV
Sbjct: 108 QDKISDFEMKLMDIDSEHLGIPEAEYHAIVKMPSSEFARICKDLSSIGDTVVISITKEGV 167

Query: 61  KFSTRGDIGAANVVLRQNTTVDK-----VLSNN---LLSFQLQY 96
           KFST+GDIG AN+V RQNT+VDK     V+  N    L+F L+Y
Sbjct: 168 KFSTKGDIGTANIVCRQNTSVDKPEEATVIEMNEPVSLTFALRY 211


>Glyma13g02460.1 
          Length = 123

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 10/83 (12%)

Query: 1  QDKISDFEMKLMDIDSEHLGIPEAEYHAIIRMPSAEFAKICRDLASIGDTVVISVSKEGV 60
          QDKISDFEMKLMDID+E+LGI E  YH         FA+IC+DL SI DT+VI ++KEGV
Sbjct: 1  QDKISDFEMKLMDIDNEYLGILEV-YH---------FARICKDLNSIDDTIVILITKEGV 50

Query: 61 KFSTRGDIGAANVVLRQNTTVDK 83
          KFST+GDIG  N+V +QNT++DK
Sbjct: 51 KFSTKGDIGTTNIVCKQNTSMDK 73


>Glyma05g19680.1 
          Length = 134

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 54/83 (65%), Gaps = 6/83 (7%)

Query: 1  QDKISDFEMKLMDIDSEHLGIPEAEYHAIIRMPSAEFAKICRDLASIGDTVVISVSKEGV 60
          QDKISDFEMKLMDIDSEHLGI EA YH    MP      +   L       V+ V+ EGV
Sbjct: 1  QDKISDFEMKLMDIDSEHLGIQEA-YHV---MPLLRCHPL--SLLRFARISVVLVTLEGV 54

Query: 61 KFSTRGDIGAANVVLRQNTTVDK 83
          KFST+GDIG  N+V +QN  VDK
Sbjct: 55 KFSTKGDIGTTNIVCKQNNFVDK 77


>Glyma14g01310.1 
          Length = 241

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 33/58 (56%), Positives = 45/58 (77%)

Query: 26  YHAIIRMPSAEFAKICRDLASIGDTVVISVSKEGVKFSTRGDIGAANVVLRQNTTVDK 83
           YHAI++MPSA+F++IC DL+  GDTV I V++EGV FST+ DIG + +  R NT+V K
Sbjct: 118 YHAIVKMPSAKFSRICTDLSIFGDTVSIEVTEEGVGFSTKRDIGTSIIFCRHNTSVHK 175


>Glyma18g04590.1 
          Length = 228

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/29 (93%), Positives = 27/29 (93%), Gaps = 1/29 (3%)

Query: 1   QDKISDFEMKLMDIDSEHLGIPEAEYHAI 29
           QDKI DFEMKLMDIDSEHLGIPEA YHAI
Sbjct: 94  QDKIYDFEMKLMDIDSEHLGIPEA-YHAI 121