Jatropha Genome Database

JcCB0747201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0747201.10 - phase: 2 /partial
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g37850.2                                                       213   4e-56
Glyma05g37850.3                                                       213   4e-56
Glyma05g37850.1                                                       213   4e-56
Glyma08g01750.2                                                       213   4e-56
Glyma08g01750.1                                                       213   4e-56
Glyma01g42900.1                                                       164   3e-41
Glyma11g02570.1                                                       134   2e-32

>Glyma05g37850.2 
          Length = 500

 Score =  213 bits (542), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYFVYRK +YIDCTG TFRDF+AG+LPCIPGELPTLNDWENHLTTIFP
Sbjct: 307 FEQYVDYALDVPMYFVYRKNRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFP 366

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDE+SL+ VLDM ADWTP
Sbjct: 367 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDELSLKSVLDMTADWTP 416


>Glyma05g37850.3 
          Length = 504

 Score =  213 bits (541), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYFVYRK +YIDCTG TFRDF+AG+LPCIPGELPTLNDWENHLTTIFP
Sbjct: 307 FEQYVDYALDVPMYFVYRKNRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFP 366

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDE+SL+ VLDM ADWTP
Sbjct: 367 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDELSLKSVLDMTADWTP 416


>Glyma05g37850.1 
          Length = 504

 Score =  213 bits (541), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPMYFVYRK +YIDCTG TFRDF+AG+LPCIPGELPTLNDWENHLTTIFP
Sbjct: 307 FEQYVDYALDVPMYFVYRKNRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFP 366

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDE+SL+ VLDM ADWTP
Sbjct: 367 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDELSLKSVLDMTADWTP 416


>Glyma08g01750.2 
          Length = 535

 Score =  213 bits (541), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           F+QYVDYALDVPMYFVYRK +YIDCTG TFRDF+AG+LPCIPGELPTLNDWENHLTTIFP
Sbjct: 313 FQQYVDYALDVPMYFVYRKHRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFP 372

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDE+SLQ VLDM ADWTP
Sbjct: 373 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQSVLDMTADWTP 422


>Glyma08g01750.1 
          Length = 535

 Score =  213 bits (541), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 104/110 (94%), Gaps = 2/110 (1%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           F+QYVDYALDVPMYFVYRK +YIDCTG TFRDF+AG+LPCIPGELPTLNDWENHLTTIFP
Sbjct: 313 FQQYVDYALDVPMYFVYRKHRYIDCTGKTFRDFLAGRLPCIPGELPTLNDWENHLTTIFP 372

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFWI--IYDEISLQHVLDMVADWTP 108
           EVRLKRYLEMRGADGGPWRRLCALPAFW+  +YDE+SLQ VLDM ADWTP
Sbjct: 373 EVRLKRYLEMRGADGGPWRRLCALPAFWVGLLYDEVSLQSVLDMTADWTP 422


>Glyma01g42900.1 
          Length = 359

 Score =  164 bits (414), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 74/88 (84%), Positives = 79/88 (89%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FE+YVDYALDVPM FVYRK KYIDC GM+FRDFMAGKLP IPG++PTL DWENHLTTIFP
Sbjct: 272 FEKYVDYALDVPMLFVYRKNKYIDCRGMSFRDFMAGKLPVIPGQVPTLGDWENHLTTIFP 331

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFW 88
           EVRLKRY+EMRGAD GP   LCALPAFW
Sbjct: 332 EVRLKRYMEMRGADDGPLEMLCALPAFW 359


>Glyma11g02570.1 
          Length = 249

 Score =  134 bits (337), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/88 (73%), Positives = 69/88 (78%), Gaps = 10/88 (11%)

Query: 1   FEQYVDYALDVPMYFVYRKKKYIDCTGMTFRDFMAGKLPCIPGELPTLNDWENHLTTIFP 60
           FEQYVDYALDVPM FVYRKK+          DFMA KLP IPG++PTL DWENHL TIFP
Sbjct: 172 FEQYVDYALDVPMLFVYRKKQ----------DFMASKLPAIPGQVPTLGDWENHLITIFP 221

Query: 61  EVRLKRYLEMRGADGGPWRRLCALPAFW 88
           EVRLKRY+EMRGAD GP   LCALPAFW
Sbjct: 222 EVRLKRYMEMRGADDGPLEMLCALPAFW 249