Jatropha Genome Database

JcCB0745041.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0745041.10 + phase: 0 /partial
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09510.1                                                       243   5e-65
Glyma17g35650.1                                                       240   2e-64
Glyma06g04590.1                                                       219   6e-58
Glyma04g04470.1                                                       218   1e-57
Glyma05g07420.1                                                       161   1e-40
Glyma06g04590.2                                                       134   3e-32
Glyma11g18540.1                                                       129   7e-31
Glyma14g09510.3                                                        98   2e-21
Glyma14g09510.2                                                        98   2e-21
Glyma03g23840.1                                                        55   2e-08

>Glyma14g09510.1 
          Length = 326

 Score =  243 bits (619), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/126 (92%), Positives = 122/126 (96%)

Query: 1   MGKWAIAVHGGAGVDPHLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELES 60
           MG WAIAVHGGAGVDP+LP +RQEEAKQLL RCLNLGISAL SNLPAIDVVELVVRELE+
Sbjct: 1   MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALNSNLPAIDVVELVVRELET 60

Query: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYL 120
           DPLFNSGRGSALTEKGTVEMEASIMDGP+RRCGAVSGLTTVKNPISLARLVMD+SPHSYL
Sbjct: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYL 120

Query: 121 AFSGAE 126
           AFSGAE
Sbjct: 121 AFSGAE 126


>Glyma17g35650.1 
          Length = 326

 Score =  240 bits (613), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 116/126 (92%), Positives = 121/126 (96%)

Query: 1   MGKWAIAVHGGAGVDPHLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELES 60
           MG WAIAVHGGAGVDP+LP +RQEEAKQLL  CLNLGISAL SNLPAIDVVELVVRELE+
Sbjct: 1   MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTHCLNLGISALNSNLPAIDVVELVVRELET 60

Query: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYL 120
           DPLFNSGRGSALTEKGTVEMEASIMDGP+RRCGAVSGLTTVKNPISLARLVMD+SPHSYL
Sbjct: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYL 120

Query: 121 AFSGAE 126
           AFSGAE
Sbjct: 121 AFSGAE 126


>Glyma06g04590.1 
          Length = 327

 Score =  219 bits (558), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 105/126 (83%), Positives = 118/126 (93%)

Query: 1   MGKWAIAVHGGAGVDPHLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELES 60
           MG WAIAVHGGAGVDP+LP +RQE+AKQLL R LNLGISALRS+  A+DVVELVVRELE+
Sbjct: 1   MGGWAIAVHGGAGVDPNLPPERQEQAKQLLTRVLNLGISALRSDASALDVVELVVRELET 60

Query: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYL 120
           DPLFNSGRG+ALTEKGT E+EASIMDG +RRCGAVSG+TTVKNPISLARLVM++SPHSYL
Sbjct: 61  DPLFNSGRGAALTEKGTAELEASIMDGYKRRCGAVSGVTTVKNPISLARLVMEKSPHSYL 120

Query: 121 AFSGAE 126
           AF+GAE
Sbjct: 121 AFNGAE 126


>Glyma04g04470.1 
          Length = 327

 Score =  218 bits (555), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 105/126 (83%), Positives = 116/126 (92%)

Query: 1   MGKWAIAVHGGAGVDPHLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELES 60
           MG WAIAVHGGAGVDP+LP +RQ++AKQLL R LNLGISALRSN  A+DVVELVVRELE+
Sbjct: 1   MGGWAIAVHGGAGVDPNLPPERQDQAKQLLTRVLNLGISALRSNASALDVVELVVRELET 60

Query: 61  DPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYL 120
           DPLFNSGRG+ALTEKGT E+EASIMDG  RRCGAVSG+TTVKNPISLARLVM+ SPHSYL
Sbjct: 61  DPLFNSGRGAALTEKGTAELEASIMDGSNRRCGAVSGVTTVKNPISLARLVMENSPHSYL 120

Query: 121 AFSGAE 126
           AF+GAE
Sbjct: 121 AFNGAE 126


>Glyma05g07420.1 
          Length = 322

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 81/124 (65%), Positives = 97/124 (78%), Gaps = 1/124 (0%)

Query: 4   WAIAVHGGAGVDP-HLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELESDP 62
           WAIA+HGGAG  P  LP +R++  ++ L  CL +G+ AL++ LP +DVVELVVRELE+ P
Sbjct: 3   WAIALHGGAGDIPLSLPPERRQPREEALRHCLQIGVEALKAKLPPLDVVELVVRELENIP 62

Query: 63  LFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYLAF 122
            FN+GRGS LT +GTVEMEASIMDG    CGAVSGLTTV N ISLARLVM+ +PH YLAF
Sbjct: 63  QFNAGRGSVLTCRGTVEMEASIMDGTTMNCGAVSGLTTVVNAISLARLVMENTPHIYLAF 122

Query: 123 SGAE 126
            GAE
Sbjct: 123 DGAE 126


>Glyma06g04590.2 
          Length = 320

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 73/82 (89%)

Query: 45  LPAIDVVELVVRELESDPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNP 104
           LP+       VRELE+DPLFNSGRG+ALTEKGT E+EASIMDG +RRCGAVSG+TTVKNP
Sbjct: 38  LPSTSSNLSYVRELETDPLFNSGRGAALTEKGTAELEASIMDGYKRRCGAVSGVTTVKNP 97

Query: 105 ISLARLVMDRSPHSYLAFSGAE 126
           ISLARLVM++SPHSYLAF+GAE
Sbjct: 98  ISLARLVMEKSPHSYLAFNGAE 119


>Glyma11g18540.1 
          Length = 148

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/71 (84%), Positives = 66/71 (92%)

Query: 56  RELESDPLFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRS 115
           RELE+ PLFNSG GSALTEKG VEMEA+IMDGP+RRC A+S LTTVKNPISLARLVMD+S
Sbjct: 27  RELETKPLFNSGDGSALTEKGMVEMEANIMDGPKRRCCAISDLTTVKNPISLARLVMDKS 86

Query: 116 PHSYLAFSGAE 126
           PHSY+AFSGAE
Sbjct: 87  PHSYVAFSGAE 97


>Glyma14g09510.3 
          Length = 247

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/47 (95%), Positives = 47/47 (100%)

Query: 80  MEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYLAFSGAE 126
           MEASIMDGP+RRCGAVSGLTTVKNPISLARLVMD+SPHSYLAFSGAE
Sbjct: 1   MEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAE 47


>Glyma14g09510.2 
          Length = 247

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/47 (95%), Positives = 47/47 (100%)

Query: 80  MEASIMDGPRRRCGAVSGLTTVKNPISLARLVMDRSPHSYLAFSGAE 126
           MEASIMDGP+RRCGAVSGLTTVKNPISLARLVMD+SPHSYLAFSGAE
Sbjct: 1   MEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAE 47


>Glyma03g23840.1 
          Length = 422

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 3   KWAIAVHGGAGVDPHLPQQRQEEAKQLLARCLNLGISALRSNLPAIDVVELVVRELESDP 62
           ++ +AVH GAG   H P   +     +   CL         +   +D V   ++ LE DP
Sbjct: 5   RYFVAVHVGAGY--HSPSNDKALRSAMNRACLAAASVLSNGSGTRLDAVVAAIQVLEDDP 62

Query: 63  LFNSGRGSALTEKGTVEMEASIMDGPRRRCGAVSGLTTVKNPISLAR 109
             N+GRGS LTE G VE +AS++DG     GAV  +       +LA+
Sbjct: 63  CTNAGRGSNLTEDGGVECDASVIDGKSGAFGAVGAVAVYYARGTLAK 109