Jatropha Genome Database

JcCB0735771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0735771.10 + phase: 2 /TE/pseudo/partial
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39430.1                                                       303   7e-83
Glyma02g25320.1                                                       138   4e-33

>Glyma01g39430.1 
          Length = 1434

 Score =  303 bits (776), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 141/190 (74%), Positives = 167/190 (87%), Gaps = 1/190 (0%)

Query: 1   SPMLASEWKKPGMLSHFTVVRKLEGGIFPMGFSKEVTERNTNAGSNVLAIESSERALLNR 60
           +PM+ASEW++P  L+ FTVVRKL+G IFPMGF+KEVT+RN   GSN+L  ESSERALLNR
Sbjct: 528 TPMMASEWRRPERLTRFTVVRKLDGSIFPMGFNKEVTDRNLQVGSNILCAESSERALLNR 587

Query: 61  LMIALSKLDSDVLVGHNISGFDLDVLLHRAQACRVPSSMWSKIGRLKRSAMPKLTKGNSI 120
           LM+ L KLDSDVLVGHNISGFDLDVLLHR+QAC+V SSMWSK+GRL RS MPKL + + +
Sbjct: 588 LMLELHKLDSDVLVGHNISGFDLDVLLHRSQACKVASSMWSKLGRLNRSTMPKLRR-SKV 646

Query: 121 FGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLARTRLNKDRKEIAPHDIPGMF 180
           FGSGA PGIMSCIAGRLLCDTYLCSRDLLKEVSYSLT LA++ LNK R E+APH++P MF
Sbjct: 647 FGSGADPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTHLAKSHLNKIRTEVAPHEVPKMF 706

Query: 181 QTSKSLIELV 190
           QT++SL++L+
Sbjct: 707 QTAESLMKLI 716


>Glyma02g25320.1 
          Length = 326

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 72/85 (84%)

Query: 8   WKKPGMLSHFTVVRKLEGGIFPMGFSKEVTERNTNAGSNVLAIESSERALLNRLMIALSK 67
           W++P  L+ FT+VRKL+G IFPMGFSKEVT+RN  AGSN+L  ESSERALLNR M+ L K
Sbjct: 174 WRRPERLTRFTIVRKLDGIIFPMGFSKEVTDRNLQAGSNILCAESSERALLNRFMLELHK 233

Query: 68  LDSDVLVGHNISGFDLDVLLHRAQA 92
           LDSDVLVGHNISGFDLDVLLHR Q 
Sbjct: 234 LDSDVLVGHNISGFDLDVLLHRFQV 258