Jatropha Genome Database

JcCB0704941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0704941.10 + phase: 0 /partial
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g24160.2                                                       129   6e-31
Glyma08g24160.1                                                       129   9e-31
Glyma07g00330.1                                                       128   1e-30
Glyma15g07110.1                                                       127   3e-30
Glyma03g27620.1                                                       125   8e-30
Glyma20g33450.1                                                       120   2e-28
Glyma15g10870.1                                                       117   3e-27
Glyma08g03060.1                                                       115   1e-26
Glyma01g00450.1                                                       112   9e-26
Glyma03g27660.1                                                       108   1e-24
Glyma01g00430.2                                                       107   3e-24
Glyma01g00430.1                                                       107   3e-24
Glyma15g35330.1                                                        67   3e-12
Glyma15g35720.1                                                        64   2e-11
Glyma13g32200.1                                                        59   2e-09

>Glyma08g24160.2 
          Length = 386

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 67/85 (78%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+V TAWALMGLIH GQ + DP PLH AAKLLINSQ E GD+PQQEI GV+MKNCM+HY 
Sbjct: 302 NVVHTAWALMGLIHAGQADRDPKPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYP 361

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
            YR+I+P+WALAEYR+     S  V
Sbjct: 362 MYRDIYPMWALAEYRRRVPLPSTEV 386


>Glyma08g24160.1 
          Length = 762

 Score =  129 bits (323), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 67/85 (78%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+V TAWALMGLIH GQ + DP PLH AAKLLINSQ E GD+PQQEI GV+MKNCM+HY 
Sbjct: 678 NVVHTAWALMGLIHAGQADRDPKPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYP 737

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
            YR+I+P+WALAEYR+     S  V
Sbjct: 738 MYRDIYPMWALAEYRRRVPLPSTEV 762


>Glyma07g00330.1 
          Length = 762

 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 58/85 (68%), Positives = 67/85 (78%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+V TAWALMGLIH GQ + DP PLH AAKLLINSQ E GD+PQQEI GV+MKNCM+HY 
Sbjct: 678 NVVHTAWALMGLIHAGQADRDPMPLHRAAKLLINSQLEEGDWPQQEITGVFMKNCMLHYP 737

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
            YR+I+P+WALAEYR+     S  V
Sbjct: 738 MYRDIYPMWALAEYRRRVPLPSTEV 762


>Glyma15g07110.1 
          Length = 694

 Score =  127 bits (319), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 1/97 (1%)

Query: 11  RNMFL-LRVRGQNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEIL 69
           R M++ L     N+VQT+WALM LIH  Q E DP PLH AAKLLINSQ E GD+PQQE L
Sbjct: 598 RKMYVPLEGSRSNVVQTSWALMALIHAEQAERDPTPLHHAAKLLINSQLEDGDWPQQETL 657

Query: 70  GVYMKNCMVHYAAYRNIFPLWALAEYRQHFSFSSKSV 106
           GVY++NC+VHY+ YRNIFP+WALAEYR +    S ++
Sbjct: 658 GVYLRNCLVHYSFYRNIFPMWALAEYRTNVLLPSFTI 694


>Glyma03g27620.1 
          Length = 620

 Score =  125 bits (315), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 66/82 (80%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+VQTAWALMGLI+ GQ E D  PLH AAKLLINSQ E GD+PQQEI GV++KNCM+HY 
Sbjct: 536 NVVQTAWALMGLIYAGQSERDLTPLHQAAKLLINSQLEEGDWPQQEITGVFLKNCMMHYP 595

Query: 82  AYRNIFPLWALAEYRQHFSFSS 103
            YRNIFP+WALAEYR+     S
Sbjct: 596 MYRNIFPMWALAEYRRRVPLPS 617


>Glyma20g33450.1 
          Length = 755

 Score =  120 bits (302), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 54/92 (58%), Positives = 69/92 (75%), Gaps = 2/92 (2%)

Query: 7   HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
           ++ ++N     + G   NLVQT+WAL+ LI  GQ EIDP P+H   KLLINSQ E GDFP
Sbjct: 658 YLSSQNKVYTNLEGNRANLVQTSWALLSLIDAGQAEIDPTPIHRGIKLLINSQMEDGDFP 717

Query: 65  QQEILGVYMKNCMVHYAAYRNIFPLWALAEYR 96
           QQEI GV+M+NC ++Y++YRNIFP+WAL EYR
Sbjct: 718 QQEITGVFMRNCTLNYSSYRNIFPIWALGEYR 749


>Glyma15g10870.1 
          Length = 733

 Score =  117 bits (292), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/76 (65%), Positives = 61/76 (80%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+VQTAWALM LIH GQ E DP P+H AAKLLINSQ E GD+PQQE+ G+++K   +HY 
Sbjct: 649 NVVQTAWALMALIHAGQAEKDPTPIHNAAKLLINSQLEDGDWPQQEVTGLFLKTGALHYP 708

Query: 82  AYRNIFPLWALAEYRQ 97
            YRN FP+WAL+EYR+
Sbjct: 709 LYRNYFPMWALSEYRK 724


>Glyma08g03060.1 
          Length = 763

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 55/101 (54%), Positives = 73/101 (72%), Gaps = 3/101 (2%)

Query: 7   HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
           ++ ++N     ++G   NLVQT+WALM LI  GQ EIDP P+    +LLINSQ E GDFP
Sbjct: 658 YLSSQNKVYTNLKGNRANLVQTSWALMSLIDAGQVEIDPTPVERGIRLLINSQMEDGDFP 717

Query: 65  QQEILGVYMKNCMVHYAAYRNIFPLWALAEYRQHFSFSSKS 105
           QQEI GV+M+NC ++Y++YRNIF +WAL EYR+   F+ KS
Sbjct: 718 QQEITGVFMRNCTLNYSSYRNIFLIWALGEYRRRV-FTHKS 757


>Glyma01g00450.1 
          Length = 767

 Score =  112 bits (280), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 60/74 (81%)

Query: 23  LVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYAA 82
           +V TAWA++ LI  GQG+ DP PLH AAK+LINSQ E G+FPQQEI GV+ K+C + Y+A
Sbjct: 679 VVNTAWAMLALIEAGQGQRDPTPLHRAAKVLINSQMENGEFPQQEITGVFNKHCTISYSA 738

Query: 83  YRNIFPLWALAEYR 96
           YRNIFP+WAL EYR
Sbjct: 739 YRNIFPIWALGEYR 752


>Glyma03g27660.1 
          Length = 386

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 50/85 (58%), Positives = 61/85 (71%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
            +V TAWAL+GLI  GQ E D   LH AAKLLINSQ + GD+PQQE+ GV+ + CM+HY 
Sbjct: 302 TVVHTAWALLGLILAGQAERDTTSLHRAAKLLINSQLKEGDWPQQELTGVFNRTCMLHYP 361

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
            YRNI+P+WALAEYR+     S  V
Sbjct: 362 MYRNIYPMWALAEYRRLVPLPSTEV 386


>Glyma01g00430.2 
          Length = 746

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 58/77 (75%)

Query: 21  QNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHY 80
            ++V T WA++ LI  GQ + D  PLH AA  LINSQ E GDFPQQEI+GV+ KNCM+ Y
Sbjct: 664 SHVVNTGWAMLALIDAGQAKRDSQPLHRAAAYLINSQLEDGDFPQQEIMGVFNKNCMITY 723

Query: 81  AAYRNIFPLWALAEYRQ 97
           AAYRNIFP+WAL EY+ 
Sbjct: 724 AAYRNIFPIWALGEYQS 740


>Glyma01g00430.1 
          Length = 757

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 48/77 (62%), Positives = 58/77 (75%)

Query: 21  QNLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHY 80
            ++V T WA++ LI  GQ + D  PLH AA  LINSQ E GDFPQQEI+GV+ KNCM+ Y
Sbjct: 675 SHVVNTGWAMLALIDAGQAKRDSQPLHRAAAYLINSQLEDGDFPQQEIMGVFNKNCMITY 734

Query: 81  AAYRNIFPLWALAEYRQ 97
           AAYRNIFP+WAL EY+ 
Sbjct: 735 AAYRNIFPIWALGEYQS 751


>Glyma15g35330.1 
          Length = 617

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 2/62 (3%)

Query: 7   HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
           ++  + M    + G   N+V TAWA++ LI  GQ E DPAPLH AAK+LI+SQ E G+FP
Sbjct: 546 YITCQTMVYTNLEGNKSNVVNTAWAMLALIEAGQAERDPAPLHHAAKVLIDSQLENGEFP 605

Query: 65  QQ 66
           QQ
Sbjct: 606 QQ 607


>Glyma15g35720.1 
          Length = 126

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 7   HVQTRNMFLLRVRGQ--NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFP 64
           ++  + M    + G   N+V TAWA++ LI  GQ E DPAPLH AAK+LI+ Q E G+FP
Sbjct: 53  YITCQTMIYTNMEGNKSNVVNTAWAMLALIEAGQAERDPAPLHHAAKVLIDLQLENGEFP 112

Query: 65  QQ 66
           QQ
Sbjct: 113 QQ 114


>Glyma13g32200.1 
          Length = 218

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 20/85 (23%)

Query: 22  NLVQTAWALMGLIHGGQGEIDPAPLHLAAKLLINSQTELGDFPQQEILGVYMKNCMVHYA 81
           N+VQTAWALM LIH    E DP PLH AA +L            +++ G      +  ++
Sbjct: 154 NIVQTAWALMALIHV---ERDPTPLHNAANIL------------EKLFG-----SLRTHS 193

Query: 82  AYRNIFPLWALAEYRQHFSFSSKSV 106
            YRN+FP WALAEYR +    S ++
Sbjct: 194 IYRNVFPRWALAEYRANVLLPSITI 218