Jatropha Genome Database

JcCB0700881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0700881.10 + phase: 2 /partial
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g09560.1                                                       255   1e-68
Glyma04g09470.1                                                       254   2e-68
Glyma04g08720.1                                                       172   1e-43
Glyma06g08820.1                                                       169   7e-43
Glyma10g05730.1                                                        97   6e-21
Glyma19g36280.1                                                        95   2e-20
Glyma13g20080.1                                                        92   2e-19
Glyma03g33570.1                                                        92   2e-19

>Glyma06g09560.1 
          Length = 414

 Score =  255 bits (652), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 114/139 (82%), Positives = 127/139 (91%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 60
           RFG WPVAML  SKNKAILEGPVCN S VIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD
Sbjct: 276 RFGTWPVAMLVPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 335

Query: 61  PKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHHL 120
           PKRW+RP S+ IRQLDTVKEGFQETTFIEQ++EDESQ+E  PPGCS+ILNWHLHL AH++
Sbjct: 336 PKRWQRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLTAHNI 395

Query: 121 VYPRGWLFQKNLDVILPIK 139
           VYP+GW+ QKNLD ++P+K
Sbjct: 396 VYPKGWVLQKNLDAVIPVK 414


>Glyma04g09470.1 
          Length = 300

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 114/139 (82%), Positives = 128/139 (92%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 60
           RFG WPVAMLA SKNKAILEGPVCN S VIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD
Sbjct: 162 RFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 221

Query: 61  PKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHHL 120
           PKRWRRP S+ +RQLDTVKEGFQETTFIEQ++EDESQ+E  PPGCS+ILNWHLHL A+++
Sbjct: 222 PKRWRRPSSNPVRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLAANNI 281

Query: 121 VYPRGWLFQKNLDVILPIK 139
           VYP+GW+ QKNLD ++P+K
Sbjct: 282 VYPKGWVLQKNLDAVIPVK 300


>Glyma04g08720.1 
          Length = 407

 Score =  172 bits (435), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 99/136 (72%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 60
           RFG W VA L   K+  +L+GP+CNGS VIGWHT+E + + +RFH +M GFAFNSTILWD
Sbjct: 267 RFGTWTVARLLGDKSSIVLQGPICNGSQVIGWHTDESNGKSKRFHAEMPGFAFNSTILWD 326

Query: 61  PKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHHL 120
           PKRW RP    IRQLD+VKE    +T IEQV+EDESQ+E +   CSR++ WH+ L++ + 
Sbjct: 327 PKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMDNCSRVMVWHIDLESSYS 386

Query: 121 VYPRGWLFQKNLDVIL 136
            YP+ W+ + NLD I+
Sbjct: 387 FYPQKWIVKNNLDAIV 402


>Glyma06g08820.1 
          Length = 433

 Score =  169 bits (429), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 74/136 (54%), Positives = 99/136 (72%)

Query: 1   RFGAWPVAMLAQSKNKAILEGPVCNGSHVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWD 60
           RFG W VA L+  K+  +L+GP+CNGS VIGWHTNE + + +RFH +M GF+FNSTILWD
Sbjct: 293 RFGTWTVARLSGDKSSIVLQGPICNGSRVIGWHTNESNGKSKRFHAEMPGFSFNSTILWD 352

Query: 61  PKRWRRPFSSAIRQLDTVKEGFQETTFIEQVIEDESQIESVPPGCSRILNWHLHLDAHHL 120
           PKRW RP    IRQLD+VKE    +T IEQV+EDESQ+E +   CSR++ W + L++ + 
Sbjct: 353 PKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMHNCSRVMVWQIDLESSYS 412

Query: 121 VYPRGWLFQKNLDVIL 136
            YP+ W+ + NLD I+
Sbjct: 413 SYPQKWIAKNNLDAIV 428


>Glyma10g05730.1 
          Length = 347

 Score = 97.1 bits (240), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 15/122 (12%)

Query: 2   FGAWPVAMLAQSKNKAILEGPVCNGSHVIGWH----TNEKSKRLRRFHVDMSGFAFNSTI 57
           FG WP A+LA +  K I+EGPVC+ S VIGWH     NE        H+  S FAFNS+I
Sbjct: 217 FGTWPTALLAANMKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHI--SSFAFNSSI 274

Query: 58  LWDPKRWRRPFSSAIRQLDTVKEGFQETTFIEQVI-EDESQIESVPP-GCSRILNWHLHL 115
           LWDP+RW R  S      +++K       F+++V+ EDE++++ +PP  CSRIL W  + 
Sbjct: 275 LWDPERWGRTSSLQDTSQNSIK-------FVKEVVLEDEAKLKGIPPEDCSRILLWRFNF 327

Query: 116 DA 117
            A
Sbjct: 328 HA 329


>Glyma19g36280.1 
          Length = 344

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 15/122 (12%)

Query: 2   FGAWPVAMLAQSKNKAILEGPVCNGSHVIGWH----TNEKSKRLRRFHVDMSGFAFNSTI 57
           FG WP A+LA  + K  +EGPVC+ S VIGWH     NE        H+  S FAFNS+I
Sbjct: 226 FGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHI--SSFAFNSSI 283

Query: 58  LWDPKRWRRPFSSAIRQLDTVKEGFQETTFIEQVI-EDESQIESVPP-GCSRILNWHLHL 115
           LWDP+RW R  S      +++K       F++QV+ EDE++++ +PP  CS+IL W  + 
Sbjct: 284 LWDPERWGRTSSVQDTSQNSIK-------FVKQVVLEDEAKLKGIPPEDCSKILLWRFNF 336

Query: 116 DA 117
            A
Sbjct: 337 RA 338


>Glyma13g20080.1 
          Length = 344

 Score = 92.0 bits (227), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 15/122 (12%)

Query: 2   FGAWPVAMLAQSKNKAILEGPVCNGSHVIGWH----TNEKSKRLRRFHVDMSGFAFNSTI 57
           FG WP A LA ++ K ++EGPVC+ S VIGWH     NE        H+  S FAFNS+I
Sbjct: 214 FGTWPTASLAANRKKVMIEGPVCDSSKVIGWHLRNMNNETDIITPPIHI--SSFAFNSSI 271

Query: 58  LWDPKRWRRPFSSAIRQLDTVKEGFQETTFIEQVI-EDESQIESVPP-GCSRILNWHLHL 115
           LWDP+RW R  S      +++K       F+++V+ ED+ ++  +PP  CSRIL W  + 
Sbjct: 272 LWDPERWGRTSSLQDTSQNSIK-------FVKEVVLEDQEKLRGIPPEDCSRILLWRFNF 324

Query: 116 DA 117
            A
Sbjct: 325 HA 326


>Glyma03g33570.1 
          Length = 342

 Score = 91.7 bits (226), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 15/122 (12%)

Query: 2   FGAWPVAMLAQSKNKAILEGPVCNGSHVIGWH----TNEKSKRLRRFHVDMSGFAFNSTI 57
           FG WP A+LA  + K  +EGPVC+ S VIGWH     NE        H+  S FAFNS+I
Sbjct: 227 FGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLKNMNNETDTITPPIHI--SSFAFNSSI 284

Query: 58  LWDPKRWRRPFSSAIRQLDTVKEGFQETTFIEQVI-EDESQIESVPP-GCSRILNWHLHL 115
           LWD +RW R  S      +++K       F++QV+ EDE++++ +PP  CS+IL W  + 
Sbjct: 285 LWDSERWGRTSSVQDTSQNSIK-------FVKQVVLEDEAKLKGIPPEDCSKILLWRFNF 337

Query: 116 DA 117
            A
Sbjct: 338 RA 339