Jatropha Genome Database

JcCB0698781.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0698781.10 - phase: 1 /pseudo/partial
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g07810.1                                                       192   2e-49
Glyma03g01270.1                                                       182   2e-46

>Glyma07g07810.1 
          Length = 257

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 119/168 (70%), Gaps = 1/168 (0%)

Query: 38  LTCRYSLSVNGHLLNQLGEGATECGGYYSKLLQEYDAIIVSSS-FVDMFSIPTSQEPGAK 96
           LT RYSLSVNG+ ++ LG+G T+CGGYYS+LLQEYDA+++SSS F +  S+P SQEPGA 
Sbjct: 50  LTLRYSLSVNGNFMDLLGDGVTDCGGYYSRLLQEYDAVVISSSLFSENLSVPASQEPGAN 109

Query: 97  QPLCVITVTARSSPIQIPSLAEDTASGIVVFAEKETTIRPETAQKGVETVVLDQVSLIEI 156
           QP+ +I     SS  QIP         +++F + +T   PE AQ+G+ETV LDQ++L  I
Sbjct: 110 QPIRIILHKDPSSSNQIPLAINGVTHKVIIFTDNKTVTAPEVAQQGIETVALDQINLDVI 169

Query: 157 LEYCKLQGLCSVLLDLRGSLGELEGLFNDGIEHNMLQKVVVEVLPLWK 204
           L+YC  QGLCSVLLD+RGS GE E L  +GI+ N + K V E+LP+W 
Sbjct: 170 LDYCNRQGLCSVLLDIRGSFGEFEDLVKEGIKKNYINKFVTEILPVWN 217


>Glyma03g01270.1 
          Length = 425

 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 116/167 (69%), Gaps = 1/167 (0%)

Query: 38  LTCRYSLSVNGHLLNQLGEGATECGGYYSKLLQEYDAIIVSSS-FVDMFSIPTSQEPGAK 96
           LT RYSLSVNG+ L+ LG G T+CGGY+S+LLQEYDA+++SSS F +  S+P SQEPGA 
Sbjct: 218 LTLRYSLSVNGNFLDLLGNGVTDCGGYHSRLLQEYDAVVISSSLFSENLSVPASQEPGAN 277

Query: 97  QPLCVITVTARSSPIQIPSLAEDTASGIVVFAEKETTIRPETAQKGVETVVLDQVSLIEI 156
           QP+ +I      S  QI          +++F + +T   PE AQ+G+E VVLDQ++L  I
Sbjct: 278 QPIRIIIHKDPGSSKQIQLAINGVTGKVIIFTDNKTVTAPEVAQQGIEIVVLDQINLDVI 337

Query: 157 LEYCKLQGLCSVLLDLRGSLGELEGLFNDGIEHNMLQKVVVEVLPLW 203
           L+YC  QGLCSVLLD+RGS GE E L  +GI+ N + K V E+LP+W
Sbjct: 338 LDYCNCQGLCSVLLDIRGSFGEFEELVKEGIKKNYINKFVTEILPVW 384