Jatropha Genome Database

JcCB0698361.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0698361.10 - phase: 0 
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g34500.1                                                        66   9e-12
Glyma14g10090.1                                                        60   5e-10
Glyma17g35100.1                                                        53   8e-08
Glyma14g10100.1                                                        48   4e-06

>Glyma08g34500.1 
          Length = 137

 Score = 66.2 bits (160), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/99 (43%), Positives = 60/99 (60%), Gaps = 16/99 (16%)

Query: 43  QERSDTTEHD--WRSSKLSKTE--------SMLLPQRN-TLLKSNT----TDGHRQQQML 87
           QERS     D  WR SK++KT+        +ML  QRN +LL+SN     +DGH Q QML
Sbjct: 1   QERSAIASEDDEWRISKVAKTDHDMPSASKAMLFQQRNNSLLRSNNATLFSDGHHQSQML 60

Query: 88  SFSCPKSEGLTVERSPRNASFPSFHLSTSSAYNRRTGTL 126
           +FS PKSE L V+++  NA+ P F     S+Y++ TG++
Sbjct: 61  NFSSPKSETLLVDKAFSNATLP-FSYHQLSSYSKNTGSI 98


>Glyma14g10090.1 
          Length = 565

 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 15/81 (18%)

Query: 27 SDRETKQELYGSGFLKQERSDTTEHD--WRSSKLSKTE--------SMLLPQR-NTLLKS 75
          SD ETK + YGSG LKQERS     D  W + K++K +        +M+  QR N+LL+S
Sbjct: 2  SDPETKHKWYGSGVLKQERSAIASEDDEWGTYKVAKIDHDMSSAPKAMIFQQRNNSLLRS 61

Query: 76 NT----TDGHRQQQMLSFSCP 92
          N     +DGH Q QMLSFS P
Sbjct: 62 NNATLFSDGHHQSQMLSFSSP 82


>Glyma17g35100.1 
          Length = 483

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 6/71 (8%)

Query: 59  SKTESMLLPQRN-TLLKSNT----TDGHRQQQMLSFSCPKSEGLTVERSPRNASFPSFHL 113
           S +++M   QRN +LL+SN     +DGH Q QML+FS PKSE L V+++  NA+ P F  
Sbjct: 3   SASKAMFFQQRNNSLLRSNNATLFSDGHHQSQMLNFSSPKSETLLVDKAFSNATLP-FSY 61

Query: 114 STSSAYNRRTG 124
              S+Y+R TG
Sbjct: 62  HQLSSYSRNTG 72


>Glyma14g10100.1 
          Length = 544

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 13/59 (22%)

Query: 52 DWRSSKLSKTE--------SMLLPQRN-TLLKSNTT---DGHRQQ-QMLSFSCPKSEGL 97
          +WR+SK++KT+        +ML  QRN +LL+SN T   DGH  Q QMLSFS PKSE L
Sbjct: 5  EWRTSKVAKTDHDMSSASKAMLFQQRNNSLLRSNATLFSDGHHHQSQMLSFSSPKSESL 63