Jatropha Genome Database

JcCB0697191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0697191.10 - phase: 1 /partial
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g38740.1                                                       235   8e-63
Glyma10g44010.1                                                       228   1e-60

>Glyma20g38740.1 
          Length = 636

 Score =  235 bits (600), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 112/132 (84%), Positives = 116/132 (87%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           KACENVTQPLKFLYP+            +SYGA GVEYSEQAEKQIEMYS+QGFSGLPIC
Sbjct: 505 KACENVTQPLKFLYPVDLSIKEKIEAIAKSYGASGVEYSEQAEKQIEMYSKQGFSGLPIC 564

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFS NA+ KGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID
Sbjct: 565 MAKTQYSFSDNAAAKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 624

Query: 121 LDTATGKVIGLS 132
           LDT TGKVIGLS
Sbjct: 625 LDTTTGKVIGLS 636


>Glyma10g44010.1 
          Length = 636

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/132 (82%), Positives = 115/132 (87%)

Query: 1   KACENVTQPLKFLYPLXXXXXXXXXXXXRSYGAQGVEYSEQAEKQIEMYSRQGFSGLPIC 60
           KAC+NVTQPLKFLYP+            +SYGA+GVEYSEQAEKQIEMYS+QGFSGLPIC
Sbjct: 505 KACKNVTQPLKFLYPVELSIKEKIEAIAKSYGARGVEYSEQAEKQIEMYSKQGFSGLPIC 564

Query: 61  MAKTQYSFSHNASEKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDID 120
           MAKTQYSFS NA+ KGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDI 
Sbjct: 565 MAKTQYSFSDNAAAKGAPSGFVLPIRDVRASIGAGFIYPLVGTMSTMPGLPTRPCFYDIG 624

Query: 121 LDTATGKVIGLS 132
           LDT T KVIGLS
Sbjct: 625 LDTTTEKVIGLS 636