Jatropha Genome Database

JcCB0696171.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0696171.10 + phase: 0 /pseudo/partial
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g43330.1                                                       100   7e-22
Glyma06g11340.1                                                       100   7e-22
Glyma06g11340.2                                                        97   5e-21
Glyma04g13010.1                                                        61   2e-10

>Glyma04g43330.1 
          Length = 443

 Score = 99.8 bits (247), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/74 (64%), Positives = 52/74 (70%)

Query: 1   LAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIK 60
           LAQKELQKINMYKAPRDKLVCILNCC+V             ENPPGADEFLPVLIYVTIK
Sbjct: 138 LAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVASRENPPGADEFLPVLIYVTIK 197

Query: 61  VRSLNMNYLLSLLQ 74
                ++  L  +Q
Sbjct: 198 ANPPQLHSNLLYIQ 211


>Glyma06g11340.1 
          Length = 467

 Score = 99.8 bits (247), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 48/74 (64%), Positives = 52/74 (70%)

Query: 1   LAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIK 60
           LAQKELQKINMYKAPRDKLVCILNCC+V             ENPPGADEFLPVLIYVTIK
Sbjct: 138 LAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVASRENPPGADEFLPVLIYVTIK 197

Query: 61  VRSLNMNYLLSLLQ 74
                ++  L  +Q
Sbjct: 198 ANPPQLHSNLLYIQ 211


>Glyma06g11340.2 
          Length = 427

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/61 (75%), Positives = 47/61 (77%)

Query: 1   LAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIK 60
           LAQKELQKINMYKAPRDKLVCILNCC+V             ENPPGADEFLPVLIYVTIK
Sbjct: 98  LAQKELQKINMYKAPRDKLVCILNCCRVISNLLLNASVASRENPPGADEFLPVLIYVTIK 157

Query: 61  V 61
            
Sbjct: 158 A 158


>Glyma04g13010.1 
          Length = 411

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 1/61 (1%)

Query: 1   LAQKELQKINMYKAPRDKLVCILNCCKVXXXXXXXXXXXXXENPPGADEFLPVLIYVTIK 60
           LA+KEL KIN +KAP +KL+ I+NCC++               P GAD FLPVLIYVTIK
Sbjct: 147 LAEKELLKINAFKAPHEKLLSIMNCCRIINNLLLNAAMSEYV-PAGADGFLPVLIYVTIK 205

Query: 61  V 61
            
Sbjct: 206 A 206