Jatropha Genome Database

JcCB0696091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0696091.10 + phase: 0 /pseudo
         (153 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46350.2                                                        94   6e-20
Glyma02g46350.1                                                        94   6e-20
Glyma18g10150.1                                                        89   2e-18
Glyma17g01310.1                                                        84   5e-17
Glyma07g39450.1                                                        83   1e-16
Glyma15g11970.1                                                        71   5e-13
Glyma08g38150.1                                                        71   5e-13
Glyma09g01160.1                                                        50   7e-07

>Glyma02g46350.2 
          Length = 543

 Score = 94.0 bits (232), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/56 (73%), Positives = 46/56 (82%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          ME    PIGSCSK++Q IY EWFN+ADSD DGRITG+DA KFF MSNL R+DLKQV
Sbjct: 1  MEFDPIPIGSCSKEHQMIYKEWFNYADSDSDGRITGSDATKFFAMSNLPREDLKQV 56


>Glyma02g46350.1 
          Length = 549

 Score = 94.0 bits (232), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/56 (73%), Positives = 46/56 (82%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          ME    PIGSCSK++Q IY EWFN+ADSD DGRITG+DA KFF MSNL R+DLKQV
Sbjct: 1  MEFDPIPIGSCSKEHQMIYKEWFNYADSDSDGRITGSDATKFFAMSNLPREDLKQV 56


>Glyma18g10150.1 
          Length = 560

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/50 (74%), Positives = 43/50 (86%)

Query: 7  PIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          P  SCSK+ Q +Y EWFN+AD+DGDGR TGN+AIKFF MSNLSRQ+LKQV
Sbjct: 1  PFDSCSKEYQNLYEEWFNYADADGDGRFTGNEAIKFFAMSNLSRQELKQV 50


>Glyma17g01310.1 
          Length = 545

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 42/56 (75%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          M+  S  I SCSK+  K Y EWFN ADSDGDGRITGNDA KFF +SNLSR  LKQV
Sbjct: 1  MKTVSDWIDSCSKEQLKTYQEWFNLADSDGDGRITGNDATKFFALSNLSRSQLKQV 56


>Glyma07g39450.1 
          Length = 545

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/56 (67%), Positives = 42/56 (75%)

Query: 1  MEISSGPIGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          M+  S  I SCSK+  K Y +WFN ADSDGDGRITGNDA KFF +SNLSR  LKQV
Sbjct: 1  MKTVSDWIDSCSKEQLKTYQDWFNLADSDGDGRITGNDATKFFALSNLSRSQLKQV 56


>Glyma15g11970.1 
          Length = 516

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/47 (65%), Positives = 36/47 (76%)

Query: 10 SCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          S SK+  K Y EWF+ ADSDGDGRI+GNDA  FF +SNLSR  LKQ+
Sbjct: 5  SRSKEETKTYQEWFDLADSDGDGRISGNDATNFFALSNLSRSQLKQL 51


>Glyma08g38150.1 
          Length = 488

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/49 (63%), Positives = 36/49 (73%)

Query: 8  IGSCSKDNQKIYLEWFNFADSDGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          I S SK+  K Y EWFN  DSDGDGRI+GND  KFF +SNLSR  LK++
Sbjct: 3  IESRSKEETKTYQEWFNLVDSDGDGRISGNDTTKFFALSNLSRSQLKRL 51


>Glyma09g01160.1 
          Length = 518

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/28 (75%), Positives = 24/28 (85%)

Query: 29 DGDGRITGNDAIKFFGMSNLSRQDLKQV 56
          DGDGRI+GNDA KFF +SNLSR  LKQ+
Sbjct: 3  DGDGRISGNDATKFFALSNLSRSQLKQL 30