Jatropha Genome Database

JcCB0696011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0696011.10 - phase: 1 /partial
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g19360.1                                                       131   2e-31
Glyma15g05630.2                                                       130   4e-31
Glyma15g05630.1                                                       130   4e-31
Glyma08g08130.1                                                       119   8e-28
Glyma15g42070.1                                                        74   3e-14
Glyma07g19710.1                                                        69   9e-13
Glyma18g52750.1                                                        66   9e-12

>Glyma08g19360.1 
          Length = 483

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 67/74 (90%)

Query: 10  KNGREIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTLMERTKHHLGYPYN 69
           K  REIVLGRN+HT CLEVTEP+A+DE TGD+EA+MASVLARY++ L ERTKHHLGYPYN
Sbjct: 53  KEKREIVLGRNIHTSCLEVTEPEADDEVTGDREAHMASVLARYKRALTERTKHHLGYPYN 112

Query: 70  LDFDYGALGQLQHF 83
           LDFDYGAL QLQHF
Sbjct: 113 LDFDYGALTQLQHF 126


>Glyma15g05630.2 
          Length = 485

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 67/74 (90%)

Query: 10  KNGREIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTLMERTKHHLGYPYN 69
           K  REIVLGRN+HT CLEVTEP+A+DE TGD+EA+MASVLARY++ L ERTKHHLGYPYN
Sbjct: 55  KEKREIVLGRNVHTTCLEVTEPEADDEITGDREAHMASVLARYKRALTERTKHHLGYPYN 114

Query: 70  LDFDYGALGQLQHF 83
           LDFDYGAL QLQHF
Sbjct: 115 LDFDYGALTQLQHF 128


>Glyma15g05630.1 
          Length = 485

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/74 (81%), Positives = 67/74 (90%)

Query: 10  KNGREIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTLMERTKHHLGYPYN 69
           K  REIVLGRN+HT CLEVTEP+A+DE TGD+EA+MASVLARY++ L ERTKHHLGYPYN
Sbjct: 55  KEKREIVLGRNVHTTCLEVTEPEADDEITGDREAHMASVLARYKRALTERTKHHLGYPYN 114

Query: 70  LDFDYGALGQLQHF 83
           LDFDYGAL QLQHF
Sbjct: 115 LDFDYGALTQLQHF 128


>Glyma08g08130.1 
          Length = 485

 Score =  119 bits (298), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 53/71 (74%), Positives = 63/71 (88%)

Query: 13  REIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTLMERTKHHLGYPYNLDF 72
           R+IVLGRN+HT CLEVTEPD +DE TG++EAYMA VLA+Y+K+L ERT +HLGYPYNL+F
Sbjct: 58  RKIVLGRNIHTTCLEVTEPDIDDEVTGEREAYMAGVLAKYKKSLTERTNYHLGYPYNLNF 117

Query: 73  DYGALGQLQHF 83
           DY AL QLQHF
Sbjct: 118 DYDALSQLQHF 128


>Glyma15g42070.1 
          Length = 98

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/48 (70%), Positives = 43/48 (89%), Gaps = 1/48 (2%)

Query: 10 KNG-REIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTL 56
          KNG R+IVLGRN+HT CLEVTEPD +DE TG++EAYMA +LA+Y+K+L
Sbjct: 10 KNGERKIVLGRNIHTTCLEVTEPDIDDEVTGEREAYMAGMLAKYKKSL 57


>Glyma07g19710.1 
          Length = 57

 Score = 69.3 bits (168), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 41/49 (83%), Gaps = 1/49 (2%)

Query: 9  NKNG-REIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKTL 56
           KNG R+IVLGRN+HT CLEVTEP  +DE  G++EAYMA +LA+Y+K+L
Sbjct: 2  TKNGERKIVLGRNIHTTCLEVTEPGIDDEVIGEREAYMAGMLAKYKKSL 50


>Glyma18g52750.1 
          Length = 172

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 38/47 (80%), Gaps = 1/47 (2%)

Query: 10 KNG-REIVLGRNLHTECLEVTEPDANDEHTGDKEAYMASVLARYRKT 55
          KNG R+IVLGRN+HT CLEVTEPD +DE TG++EAYMA + + +  T
Sbjct: 4  KNGERKIVLGRNIHTTCLEVTEPDIDDEVTGEREAYMAGIFSIFPST 50