Jatropha Genome Database

JcCB0695691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0695691.10 - phase: 1 /TE/partial
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39720.1                                                       133   4e-32

>Glyma03g39720.1 
          Length = 1934

 Score =  133 bits (335), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 64/91 (70%), Positives = 73/91 (80%)

Query: 27  DSYTNAIALALEXXXXXXXXXXXXRQYVHGCSLVRARKFYGYNSSEELFVKIYLYYPHDV 86
           D++T  +A +LE            RQ+VHGCSLVRARKFYGY+S EELFVKIYLYYP DV
Sbjct: 85  DAFTYKVAASLEKALKLKGNAGSSRQHVHGCSLVRARKFYGYHSLEELFVKIYLYYPQDV 144

Query: 87  SRAANLLLGGAVLDKSLKPHESHIPFILQFM 117
           SRAANLLL GAVLDKSL+P+ESHIPFILQF+
Sbjct: 145 SRAANLLLAGAVLDKSLQPYESHIPFILQFL 175