Jatropha Genome Database

JcCB0695521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0695521.10 - phase: 0 /pseudo/partial
         (154 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g24910.1                                                       119   1e-27
Glyma07g31530.1                                                       112   2e-25

>Glyma13g24910.1 
          Length = 139

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/97 (67%), Positives = 75/97 (77%), Gaps = 2/97 (2%)

Query: 58  LSECNEICYKDPVFKDQQWSAYIDRSPGAASYSEECFHACVAGCGYKFEIEPDKVDQVRP 117
           L +CN+ICYKDPV KDQQWSAYIDRSPGAASYSEECFHACV+GCGYKFE++P++ D+V P
Sbjct: 45  LEDCNQICYKDPVLKDQQWSAYIDRSPGAASYSEECFHACVSGCGYKFEVKPEEADKVSP 104

Query: 118 NRPSKPPPSVKPAHIQKPPPIASKPDEPAEDIPCTSA 154
           NR  KP    KP    KP P+   P +P  DIP TSA
Sbjct: 105 NRQLKPETKPKPQPKPKPQPVC--PIDPPSDIPDTSA 139


>Glyma07g31530.1 
          Length = 137

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 70/97 (72%), Gaps = 4/97 (4%)

Query: 58  LSECNEICYKDPVFKDQQWSAYIDRSPGAASYSEECFHACVAGCGYKFEIEPDKVDQVRP 117
           L +CN+ICYKDPV KDQQWSAYIDRSPGAASYSEECFHACV+GCGYKFE++ ++ D+V P
Sbjct: 45  LEDCNQICYKDPVLKDQQWSAYIDRSPGAASYSEECFHACVSGCGYKFEVKSEEADKVCP 104

Query: 118 NRPSKPPPSVKPAHIQKPPPIASKPDEPAEDIPCTSA 154
           NR  KP          +P     +P +   DIP TSA
Sbjct: 105 NRQPKPETKPTKKPKPQP----VRPIDLPGDIPDTSA 137