Jatropha Genome Database

JcCB0691701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0691701.10 + phase: 0 
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g00450.1                                                        52   1e-07
Glyma19g32690.1                                                        50   5e-07
Glyma14g04840.1                                                        49   2e-06
Glyma03g29800.1                                                        47   7e-06
Glyma19g32680.1                                                        47   7e-06
Glyma03g29810.1                                                        46   7e-06

>Glyma11g00450.1 
          Length = 122

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/25 (100%), Positives = 25/25 (100%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEEPQEQIHKIRITLSSKNVKNLEK
Sbjct: 13 LEEPQEQIHKIRITLSSKNVKNLEK 37


>Glyma19g32690.1 
          Length = 123

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 24/25 (96%), Positives = 25/25 (100%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEEPQEQIHKIRITLSSK+VKNLEK
Sbjct: 14 LEEPQEQIHKIRITLSSKHVKNLEK 38


>Glyma14g04840.1 
          Length = 122

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/25 (96%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSKNVKNLEK
Sbjct: 13 LEESQEQIHKIRITLSSKNVKNLEK 37


>Glyma03g29800.1 
          Length = 123

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+VKNLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVKNLEK 38


>Glyma19g32680.1 
          Length = 123

 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+VKNLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVKNLEK 38


>Glyma03g29810.1 
          Length = 123

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 24/25 (96%)

Query: 15 LEEPQEQIHKIRITLSSKNVKNLEK 39
          LEE QEQIHKIRITLSSK+VKNLEK
Sbjct: 14 LEESQEQIHKIRITLSSKHVKNLEK 38