Jatropha Genome Database

JcCB0687271.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0687271.10 - phase: 1 /partial
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31490.1                                                       220   7e-58
Glyma03g31490.2                                                       220   9e-58
Glyma19g34340.1                                                       219   2e-57

>Glyma03g31490.1 
          Length = 543

 Score =  220 bits (561), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 114/173 (65%), Positives = 122/173 (70%), Gaps = 15/173 (8%)

Query: 34  MRTFTAARLQTNXXXXXXXXXXXXXXXXXXRNTKLKAENSTVKIEKSDXXXXXXXXXXXX 93
           MRTFTA+RL                     RNTKLK ENSTVKIE SD            
Sbjct: 103 MRTFTASRLSN--------------PPSAPRNTKLKTENSTVKIENSDGAKDAGAVGSGA 148

Query: 94  XXXXXXXSVPSLSKEDAVKIFTENLQTSGAYSAREENLKREEEAGRLKFVCLSNDGIDEH 153
                      + KED  KIFT+NLQTSGAY+AREE+LK+EEEAG+LKFVCLSNDG+DEH
Sbjct: 149 AAAAGPVPG-IVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGKLKFVCLSNDGVDEH 207

Query: 154 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRHNHVVGGITYRPYV 206
           MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR NHVVGGITYRPY 
Sbjct: 208 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYA 260


>Glyma03g31490.2 
          Length = 418

 Score =  220 bits (561), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 114/172 (66%), Positives = 122/172 (70%), Gaps = 15/172 (8%)

Query: 34  MRTFTAARLQTNXXXXXXXXXXXXXXXXXXRNTKLKAENSTVKIEKSDXXXXXXXXXXXX 93
           MRTFTA+RL                     RNTKLK ENSTVKIE SD            
Sbjct: 103 MRTFTASRLSN--------------PPSAPRNTKLKTENSTVKIENSDGAKDAGAVGSGA 148

Query: 94  XXXXXXXSVPSLSKEDAVKIFTENLQTSGAYSAREENLKREEEAGRLKFVCLSNDGIDEH 153
                      + KED  KIFT+NLQTSGAY+AREE+LK+EEEAG+LKFVCLSNDG+DEH
Sbjct: 149 AAAAGPVPG-IVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGKLKFVCLSNDGVDEH 207

Query: 154 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRHNHVVGGITYRPY 205
           MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR NHVVGGITYRPY
Sbjct: 208 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPY 259


>Glyma19g34340.1 
          Length = 540

 Score =  219 bits (557), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 113/173 (65%), Positives = 122/173 (70%), Gaps = 16/173 (9%)

Query: 34  MRTFTAARLQTNXXXXXXXXXXXXXXXXXXRNTKLKAENSTVKIEKSDXXXXXXXXXXXX 93
           +RTFTA+RL                     RNTKLK E STVKIE SD            
Sbjct: 101 IRTFTASRLSN--------------PPSAPRNTKLKTEISTVKIENSDGAKDAVVGACAA 146

Query: 94  XXXXXXXSVPSLSKEDAVKIFTENLQTSGAYSAREENLKREEEAGRLKFVCLSNDGIDEH 153
                   +  + KED  KIFT+NLQTSGAY+AREE+LK+EEEAGRLKFVCLSNDG+DEH
Sbjct: 147 ASAGSVPGI--VVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCLSNDGVDEH 204

Query: 154 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRHNHVVGGITYRPYV 206
           MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIR NHVVGGITYRPY 
Sbjct: 205 MVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYA 257