Jatropha Genome Database

JcCB0684951.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0684951.10 - phase: 0 /partial
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g26210.1                                                       232   1e-61
Glyma02g07250.1                                                       230   4e-61

>Glyma16g26210.1 
          Length = 490

 Score =  232 bits (591), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 112/139 (80%), Positives = 124/139 (89%)

Query: 1   ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSNRGAQKLARIRENSNFFRSE 60
           +LIQ+LKYTCPAHLYATSISPPAA+QIIS+I+VILGEDGSNRGAQKLA+IRENSNFFRSE
Sbjct: 325 DLIQHLKYTCPAHLYATSISPPAAQQIISSIRVILGEDGSNRGAQKLAQIRENSNFFRSE 384

Query: 61  LIKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICI 120
           L KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN            LLLARARICI
Sbjct: 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAIVTVAFPATPLLLARARICI 444

Query: 121 SASHTKEDLIKALEVNSVI 139
           SA+H++EDLIKAL+V S +
Sbjct: 445 SAAHSREDLIKALQVISRV 463


>Glyma02g07250.1 
          Length = 489

 Score =  230 bits (586), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 111/137 (81%), Positives = 122/137 (89%)

Query: 1   ELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSNRGAQKLARIRENSNFFRSE 60
           +LIQ+LKY CPAHLYATSISPPAA+QIIS+I+VILGEDGSNRGAQKLA+IRENSNFFRSE
Sbjct: 325 DLIQHLKYACPAHLYATSISPPAAQQIISSIRVILGEDGSNRGAQKLAQIRENSNFFRSE 384

Query: 61  LIKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICI 120
           L KMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECL+QN            LLLARARICI
Sbjct: 385 LQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVTVAFPATPLLLARARICI 444

Query: 121 SASHTKEDLIKALEVNS 137
           SA+H++EDLIKAL+V S
Sbjct: 445 SAAHSREDLIKALQVIS 461