Jatropha Genome Database

JcCB0682701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0682701.10 - phase: 0 /partial
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03260.1                                                       134   2e-32
Glyma07g15580.1                                                       132   1e-31
Glyma01g00540.1                                                       130   3e-31
Glyma05g36340.1                                                        95   2e-20
Glyma09g17800.1                                                        77   5e-15
Glyma01g00710.1                                                        63   9e-11
Glyma07g15360.1                                                        62   2e-10
Glyma07g28900.1                                                        60   4e-10

>Glyma08g03260.1 
          Length = 158

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 65/75 (86%)

Query: 24  VPIHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 83
           +PI +LNIGV+    +VSVSKECSR CES FCSVPP LRYGKYCGLLYSGCPGE+PCDGL
Sbjct: 26  IPISSLNIGVETTGITVSVSKECSRTCESSFCSVPPLLRYGKYCGLLYSGCPGEKPCDGL 85

Query: 84  DACCMKHDACVQAKN 98
           DACCM HD CVQAKN
Sbjct: 86  DACCMYHDKCVQAKN 100


>Glyma07g15580.1 
          Length = 156

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 59/75 (78%), Positives = 63/75 (84%)

Query: 24 VPIHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 83
           P+ ALNIG +    +VSV KECSR+CES FCSVPP LRYGKYCGLLYSGCPGERPCDGL
Sbjct: 24 TPVRALNIGAETTGVAVSVGKECSRQCESSFCSVPPLLRYGKYCGLLYSGCPGERPCDGL 83

Query: 84 DACCMKHDACVQAKN 98
          DACCMKHD CV AKN
Sbjct: 84 DACCMKHDQCVSAKN 98


>Glyma01g00540.1 
          Length = 157

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 63/75 (84%)

Query: 24 VPIHALNIGVQRADASVSVSKECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGL 83
           P  ALNIG +    +VSVSKECSR+CES FCSVPP LRYGKYCGLLYSGCPGERPCDGL
Sbjct: 25 TPACALNIGAETTGVAVSVSKECSRQCESSFCSVPPLLRYGKYCGLLYSGCPGERPCDGL 84

Query: 84 DACCMKHDACVQAKN 98
          DACCMKHD CV AKN
Sbjct: 85 DACCMKHDQCVSAKN 99


>Glyma05g36340.1 
          Length = 107

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 45/51 (88%), Gaps = 1/51 (1%)

Query: 48 RKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQAKN 98
          R CES FCSVP  LRYGKYCGLLYSGCPGE+PCDGLDACC+ HD CVQAKN
Sbjct: 37 RTCESSFCSVP-LLRYGKYCGLLYSGCPGEKPCDGLDACCIYHDKCVQAKN 86


>Glyma09g17800.1 
          Length = 69

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 33/41 (80%), Positives = 35/41 (85%)

Query: 54 FCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACV 94
          F  +PP LRYGKYCG LYSGCP ERPCDGLDACCMKHD C+
Sbjct: 12 FFCLPPLLRYGKYCGFLYSGCPWERPCDGLDACCMKHDQCL 52


>Glyma01g00710.1 
          Length = 138

 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 45 ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQ 95
           CS  C +E C     ++YGKYCG+ Y GC GE+PCD LDACCM HD CV 
Sbjct: 29 NCSTTCIAEQCDTVG-IKYGKYCGVGYWGCAGEKPCDDLDACCMAHDDCVD 78


>Glyma07g15360.1 
          Length = 138

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 45 ECSRKCESEFCSVPPFLRYGKYCGLLYSGCPGERPCDGLDACCMKHDACVQ 95
           CS  C  E C     ++YGKYCG+ Y GC GE+PCD LDACCM HD CV 
Sbjct: 28 NCSTTCIVEQCDTIG-IKYGKYCGVGYWGCAGEKPCDDLDACCMAHDNCVD 77


>Glyma07g28900.1 
          Length = 49

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%)

Query: 65 KYCGLLYSGCPGERPCDGLDACCMKHDACVQAKN 98
          +Y GLLY+GCPGE+PCD LDACC+ HD CVQ KN
Sbjct: 14 QYYGLLYNGCPGEKPCDDLDACCIYHDKCVQVKN 47