Jatropha Genome Database

JcCB0652571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0652571.10 + phase: 1 /pseudo/partial
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g30490.1                                                       228   1e-60
Glyma12g30490.2                                                       227   2e-60
Glyma12g08930.1                                                       217   2e-57
Glyma11g19550.1                                                       211   1e-55
Glyma11g19550.2                                                       211   2e-55
Glyma11g19090.1                                                       176   7e-45
Glyma12g09350.1                                                       170   3e-43
Glyma15g20840.1                                                       169   1e-42
Glyma17g05440.1                                                        80   7e-16

>Glyma12g30490.1 
          Length = 387

 Score =  228 bits (581), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 109/113 (96%), Positives = 109/113 (96%)

Query: 1   LDVYNDKI*HLLEPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 60
           LDVYNDKI HLLEP TL WA RIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT
Sbjct: 46  LDVYNDKIKHLLEPHTLPWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 105

Query: 61  RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD
Sbjct: 106 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 158


>Glyma12g30490.2 
          Length = 314

 Score =  227 bits (578), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 109/113 (96%), Positives = 109/113 (96%)

Query: 1   LDVYNDKI*HLLEPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 60
           LDVYNDKI HLLEP TL WA RIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT
Sbjct: 46  LDVYNDKIKHLLEPHTLPWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 105

Query: 61  RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD
Sbjct: 106 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 158


>Glyma12g08930.1 
          Length = 385

 Score =  217 bits (553), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 103/113 (91%), Positives = 106/113 (93%)

Query: 1   LDVYNDKI*HLLEPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 60
           LDVYNDKI HLLEP    WA RI FHRLNIKHDSRLEGLIKM+DLTINLAAICTPADYNT
Sbjct: 44  LDVYNDKIKHLLEPSDSPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 103

Query: 61  RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG+FLPKDSPLR+D
Sbjct: 104 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKD 156


>Glyma11g19550.1 
          Length = 387

 Score =  211 bits (537), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 107/115 (93%), Gaps = 2/115 (1%)

Query: 1   LDVYNDKI*HLLEP--ETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADY 58
           LDVY+DKI HLL+P    L WA RI FHRLNIKHDSRLEGLIKM+DLTINLAAICTPADY
Sbjct: 44  LDVYSDKIKHLLDPADSPLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADY 103

Query: 59  NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG+FLPKDSPLR+D
Sbjct: 104 NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKD 158


>Glyma11g19550.2 
          Length = 356

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 102/115 (88%), Positives = 107/115 (93%), Gaps = 2/115 (1%)

Query: 1   LDVYNDKI*HLLEP--ETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADY 58
           LDVY+DKI HLL+P    L WA RI FHRLNIKHDSRLEGLIKM+DLTINLAAICTPADY
Sbjct: 44  LDVYSDKIKHLLDPADSPLPWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADY 103

Query: 59  NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG+FLPKDSPLR+D
Sbjct: 104 NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKD 158


>Glyma11g19090.1 
          Length = 381

 Score =  176 bits (445), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 84/113 (74%), Positives = 101/113 (89%), Gaps = 3/113 (2%)

Query: 1   LDVYNDKI*HLLEPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 60
           +DV ++KI HLL+  +L WA RI+FH++NIK DSRLE L++ +DLTINLAAICTPADYNT
Sbjct: 44  VDVSSEKINHLLD-RSLPWAHRIEFHQMNIKSDSRLETLVQTTDLTINLAAICTPADYNT 102

Query: 61  RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           RPLDTI+SNFIDA+PV+KYC+ENNKRLIHFSTCEVYGKTIGSFLP++   RQD
Sbjct: 103 RPLDTIFSNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGSFLPEE--YRQD 153


>Glyma12g09350.1 
          Length = 381

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 82/113 (72%), Positives = 99/113 (87%), Gaps = 3/113 (2%)

Query: 1   LDVYNDKI*HLLEPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNT 60
           +DV ++KI HLL+  +L WA RI+FH++NIK DSRLE L++ +DLTINLAAI TPADYNT
Sbjct: 44  VDVSSEKINHLLD-RSLPWAHRIEFHQMNIKSDSRLETLVQTTDLTINLAAIYTPADYNT 102

Query: 61  RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           RPLDTI+ NFIDA+PV+KYC+ENNKRLIHFSTCEVYGKTIGSFLP++   RQD
Sbjct: 103 RPLDTIFGNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGSFLPEE--YRQD 153


>Glyma15g20840.1 
          Length = 142

 Score =  169 bits (427), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/98 (83%), Positives = 84/98 (85%)

Query: 13  EPETLTWADRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFID 72
            PETL W  RIQ H LNIKHDSRLEGLIK+ D+TINLAA CT  DYNT PL TIYSNFID
Sbjct: 44  NPETLLWIGRIQLHSLNIKHDSRLEGLIKIIDMTINLAASCTHKDYNTCPLYTIYSNFID 103

Query: 73  ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPL 110
            LPVVKYC ENNKRLIHFSTCEVYGKTIGSFLPKDSPL
Sbjct: 104 VLPVVKYCMENNKRLIHFSTCEVYGKTIGSFLPKDSPL 141


>Glyma17g05440.1 
          Length = 263

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 36/37 (97%), Positives = 36/37 (97%)

Query: 77  VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 113
           VKYCSENNKRLIHFST EVYGKTIGSFLPKDSPLRQD
Sbjct: 1   VKYCSENNKRLIHFSTSEVYGKTIGSFLPKDSPLRQD 37