Jatropha Genome Database

JcCB0646891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0646891.10 - phase: 0 /partial
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g10710.1                                                       141   2e-34
Glyma05g01180.1                                                       141   2e-34
Glyma04g33900.2                                                       140   4e-34
Glyma06g20540.1                                                       140   4e-34
Glyma04g33900.1                                                       140   4e-34
Glyma16g17510.1                                                        57   6e-09

>Glyma17g10710.1 
          Length = 197

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/72 (97%), Positives = 71/72 (98%)

Query: 1   EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 60
           EKNPRRIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH
Sbjct: 66  EKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125

Query: 61  HARVLIRQRHIR 72
           HARVLIRQRHIR
Sbjct: 126 HARVLIRQRHIR 137


>Glyma05g01180.1 
          Length = 197

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/72 (97%), Positives = 71/72 (98%)

Query: 1   EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 60
           EKNPRRIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH
Sbjct: 66  EKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125

Query: 61  HARVLIRQRHIR 72
           HARVLIRQRHIR
Sbjct: 126 HARVLIRQRHIR 137


>Glyma04g33900.2 
          Length = 183

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/72 (95%), Positives = 71/72 (98%)

Query: 1   EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 60
           EKNPRRIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH
Sbjct: 66  EKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125

Query: 61  HARVLIRQRHIR 72
           HARVLI+QRHIR
Sbjct: 126 HARVLIKQRHIR 137


>Glyma06g20540.1 
          Length = 197

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/72 (95%), Positives = 71/72 (98%)

Query: 1   EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 60
           EKNPRRIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH
Sbjct: 66  EKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125

Query: 61  HARVLIRQRHIR 72
           HARVLI+QRHIR
Sbjct: 126 HARVLIKQRHIR 137


>Glyma04g33900.1 
          Length = 197

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/72 (95%), Positives = 71/72 (98%)

Query: 1   EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 60
           EKNPRRIFEGEALLRRM RYGLLDE+QNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH
Sbjct: 66  EKNPRRIFEGEALLRRMFRYGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIH 125

Query: 61  HARVLIRQRHIR 72
           HARVLI+QRHIR
Sbjct: 126 HARVLIKQRHIR 137


>Glyma16g17510.1 
          Length = 77

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 30/38 (78%)

Query: 1  EKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTV 38
          EKN  RIFEGEALL +M RY LLDE+QN LDYV A T+
Sbjct: 38 EKNLHRIFEGEALLHKMFRYYLLDETQNNLDYVFAFTL 75