Jatropha Genome Database

JcCB0645591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0645591.10 - phase: 0 /pseudo
         (95 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g40510.1                                                       100   3e-22
Glyma17g37650.1                                                       100   5e-22
Glyma20g37260.1                                                        85   1e-17
Glyma20g37260.2                                                        85   1e-17
Glyma03g40500.1                                                        84   3e-17
Glyma10g30150.1                                                        83   6e-17
Glyma19g43160.1                                                        82   1e-16
Glyma11g18390.1                                                        70   7e-13

>Glyma14g40510.1 
          Length = 1075

 Score =  100 bits (249), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 50/68 (73%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXXXXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGIIH 60
          MGVPAFYRWLAEKYP+                 IPVDTS+ NPN+IEYDNLYLDMNGIIH
Sbjct: 1  MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60

Query: 61 PCFHPEDR 68
          PCFHPEDR
Sbjct: 61 PCFHPEDR 68


>Glyma17g37650.1 
          Length = 1039

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/68 (69%), Positives = 49/68 (72%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXXXXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGIIH 60
          MGVPAFYRWLAEKYP+                 IPVDTS  NPN+IEYDNLYLDMNGIIH
Sbjct: 1  MGVPAFYRWLAEKYPMVIVDAIEEEAVVIDGVQIPVDTSNKNPNNIEYDNLYLDMNGIIH 60

Query: 61 PCFHPEDR 68
          PCFHPEDR
Sbjct: 61 PCFHPEDR 68


>Glyma20g37260.1 
          Length = 932

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXX-XXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGII 59
          MGVPAFYRWLA++YPL                   P+D S+PNPN +E+DNLYLDMNGII
Sbjct: 1  MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60

Query: 60 HPCFHPEDR 68
          HPCFHP+ +
Sbjct: 61 HPCFHPDGK 69


>Glyma20g37260.2 
          Length = 931

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXX-XXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGII 59
          MGVPAFYRWLA++YPL                   P+D S+PNPN +E+DNLYLDMNGII
Sbjct: 1  MGVPAFYRWLADRYPLSIADVVEEDPAVGDDGVPFPIDASKPNPNGMEFDNLYLDMNGII 60

Query: 60 HPCFHPEDR 68
          HPCFHP+ +
Sbjct: 61 HPCFHPDGK 69


>Glyma03g40500.1 
          Length = 966

 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 46/68 (67%), Gaps = 3/68 (4%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXXXXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGIIH 60
          MGVPAFYRWLA++YPL                   VD S+PNPN +E+DNLYLDMNGIIH
Sbjct: 1  MGVPAFYRWLADRYPLSIADVVEEEPSVGSGA---VDVSKPNPNGMEFDNLYLDMNGIIH 57

Query: 61 PCFHPEDR 68
          PCFHP+ +
Sbjct: 58 PCFHPDGK 65


>Glyma10g30150.1 
          Length = 344

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXX-XXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGII 59
          MGVPAFYRWLA++YPL                  +P+D S+PNPN +E+DNLYLDMNGII
Sbjct: 1  MGVPAFYRWLADRYPLSIADAVEVDPSVAEDGVPLPIDASKPNPNGMEFDNLYLDMNGII 60

Query: 60 HPCFHPEDR 68
          H CFHP+ +
Sbjct: 61 HHCFHPDGK 69


>Glyma19g43160.1 
          Length = 957

 Score = 82.4 bits (202), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 46/68 (67%), Gaps = 5/68 (7%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXXXXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGIIH 60
          MGVPAFYRWLA++YPL                   VD S+PNP+ +E+DNLYLDMNGIIH
Sbjct: 1  MGVPAFYRWLADRYPLSITDVVEEDPSAGA-----VDVSKPNPSGMEFDNLYLDMNGIIH 55

Query: 61 PCFHPEDR 68
          PCFHP+ +
Sbjct: 56 PCFHPDGK 63


>Glyma11g18390.1 
          Length = 755

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 13/67 (19%)

Query: 1  MGVPAFYRWLAEKYPLXXXXXXXXXXXXXXXXNIPVDTSRPNPNSIEYDNLYLDMNGIIH 60
          MGVP+FYRWL  KYP                 ++   T + +PN +++ NLYLDMN IIH
Sbjct: 1  MGVPSFYRWLVNKYP-------------KVVQDVVDPTMQEDPNGVKFGNLYLDMNAIIH 47

Query: 61 PCFHPED 67
          PCFHPED
Sbjct: 48 PCFHPED 54