Jatropha Genome Database
- JcCB0644471.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0644471.10 + phase: 0 /TE/partial
(639 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g13170.1 74 7e-13
Glyma18g38660.1 73 1e-12
Glyma20g39450.2 66 1e-10
Glyma18g08460.1 65 2e-10
Glyma11g18250.1 59 2e-08
Glyma09g00270.1 59 2e-08
Glyma01g29320.1 54 8e-07
Glyma16g29090.1 52 2e-06
Glyma20g23840.1 51 3e-06
Glyma01g16600.1 51 4e-06
>Glyma04g13170.1
Length = 284
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%)
Query: 89 WWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQQVRSDLANCK 148
W N+M+VSW+ H + ++ +I M+N D+W+D+K R+S G+ R+ ++ LA+ K
Sbjct: 74 WKKANNMVVSWLVHLVATSIHQSILWMDNAIDIWKDLKARYSQGDLLRISNLQHKLASIK 133
Query: 149 QDGQAIVTYYSRLKTIWDELNNY 171
Q I Y+++L TIWDEL +Y
Sbjct: 134 QGDMNITDYFTKLGTIWDELESY 156
>Glyma18g38660.1
Length = 1634
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 55/83 (66%)
Query: 89 WWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQQVRSDLANCK 148
W N ++ SW+ +++EP++ +I M+N SD+W D+K+RFS G+ RV +++ ++
Sbjct: 81 WNRCNMLIHSWILNSVEPSISRSIVFMDNASDVWLDLKERFSQGDLVRVSEIQQEIYALT 140
Query: 149 QDGQAIVTYYSRLKTIWDELNNY 171
Q +++ T+YS LK +W+EL Y
Sbjct: 141 QGTRSVTTFYSDLKALWEELEIY 163
>Glyma20g39450.2
Length = 2005
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 51/83 (61%)
Query: 89 WWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQQVRSDLANCK 148
W N+M+VSW+ H++ ++R +I M+ ++W D+K R+S G+ R+ ++ + + K
Sbjct: 368 WCRCNNMVVSWIVHSVATSIRQSILWMDKAEEIWRDLKSRYSQGDLLRISDLQQEASTMK 427
Query: 149 QDGQAIVTYYSRLKTIWDELNNY 171
Q + Y++ L+ IWDE+ N+
Sbjct: 428 QGTLTVTEYFTCLRVIWDEIENF 450
>Glyma18g08460.1
Length = 263
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 54/83 (65%)
Query: 89 WWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQQVRSDLANCK 148
W N+M+VSW+ H + ++R +I M++V ++W D+K R+S G+ R+ ++ + ++ K
Sbjct: 31 WKRCNNMVVSWLVHFVSSSIRLSILWMDSVEEIWCDLKSRYSHGDLLRISSLQLEASSIK 90
Query: 149 QDGQAIVTYYSRLKTIWDELNNY 171
Q + Y+++L+ IWDEL N+
Sbjct: 91 QGDLFVTDYFTQLRIIWDELENF 113
>Glyma11g18250.1
Length = 457
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 53/97 (54%)
Query: 79 PANDSLELEDWWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQ 138
P + + W N M+V+W+ ++ P + + +++N LW+++K+RF+ GN +
Sbjct: 156 PKKEDANYKAWQRCNIMVVTWITQSLSPQIAQSTIYIDNAKKLWDELKERFTKGNYFIIS 215
Query: 139 QVRSDLANCKQDGQAIVTYYSRLKTIWDELNNYDKYQ 175
+ ++ KQ +++ +++ LK +WDEL+ Q
Sbjct: 216 DLLQEIHFIKQRERSVTDFFTELKILWDELDMVSPTQ 252
>Glyma09g00270.1
Length = 791
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 110 STISHMENVSDLWEDIKQRFSVGNGPRVQQVRSDLANCKQDGQAIVTYYSRLKTIWDELN 169
S+I ++WED+K RFS N PR+ Q+R L + +Q + TYY++LK++W+EL+
Sbjct: 69 SSILVANTTKEIWEDLKTRFSRKNDPRIFQLRRQLMSLQQGSDDVNTYYTKLKSVWEELS 128
Query: 170 NY 171
Y
Sbjct: 129 GY 130
>Glyma01g29320.1
Length = 989
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 71 LRXWNCETPANDSLELE--DWWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQR 128
LR N E P D+ + + W NSM+++W+ +++E + S +LW+ + +
Sbjct: 28 LRYLNGERPKPDTADPQYAVWDAENSMVMTWLVNSMEEDISSNYMCYSTAKELWDSVTEM 87
Query: 129 FS-VGNGPRVQQVRSDLANCKQDGQAIVTYYSRLKTIWDELNNYDKYQYVITSDAK 183
+S +GN ++ ++ +Q G + Y+ LK +W +L+ ++ Y++ DAK
Sbjct: 88 YSDLGNKSQIYELTLQAREIRQGGNNVTKYFHSLKRVWQDLDLFNTYKWNSAEDAK 143
>Glyma16g29090.1
Length = 518
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 79 PANDSLELEDWWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFSVGNGPRVQ 138
P +D L E W N +++SW+ +I + ++ + S +W+ + RFS G+ RV
Sbjct: 399 PISDPL-YEPWLRCNKLVLSWLQRSISEEIAKSLLWCDRASLVWKSLANRFSQGDIFRVA 457
Query: 139 QVRSDLANCKQDGQAIVTYYSRLKTIWDELNNY 171
++ ++A +Q I +Y+++L T W+E+ N+
Sbjct: 458 DIQEEVARLQQGTLDISSYFTKLMTPWEEIENF 490
>Glyma20g23840.1
Length = 574
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 79 PANDSLELEDWWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFS-VGNGPRV 137
P N W +L+ W+++++ P + M+ D+WE+ KQ +S VG+ ++
Sbjct: 2 PQNPDNTFGAWDEAVVVLMLWLWNSMVPEVSDACMFMKTAKDVWENCKQNYSKVGDAAQI 61
Query: 138 QQVRSDLANCKQDGQAIVTYYSRLKTIWDELNNYDKYQYVITSDA 182
++ +A KQ +++ L+ +W EL++Y++++ T DA
Sbjct: 62 YEIEMKIAITKQGDRSVSECAQTLQNLWLELDHYEQFEAKCTEDA 106
>Glyma01g16600.1
Length = 2962
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 78 TPANDSLELEDWWTLNSMLVSWVFHTIEPTLRSTISHMENVSDLWEDIKQRFS-VGNGPR 136
P + + W +SM+++W+++++ P + T +++ ++WE ++Q +S + +
Sbjct: 59 APDEKDAKFKSWDEEDSMIMAWLWNSMVPEISDTCMFLKSAKEIWEAVEQTYSKAKDAAQ 118
Query: 137 VQQVRSDLANCKQDGQAIVTYYSRLKTIWDELNNY 171
+ V+ KQ +++ Y ++LK++W EL++Y
Sbjct: 119 IYDVKVKTLGAKQGNKSVTEYANQLKSLWMELDHY 153