Jatropha Genome Database

JcCB0644101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0644101.10 + phase: 1 /partial
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g43220.1                                                       122   2e-28
Glyma10g11700.1                                                       112   3e-25
Glyma09g36150.1                                                       110   1e-24
Glyma02g02240.1                                                       107   1e-23

>Glyma15g43220.1 
          Length = 461

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 118/219 (53%), Gaps = 20/219 (9%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFG-GGPVFNPXXXXX 59
           I AAK + E GI+D++ILEAS R+GGR+ K  F G++VE GA W+ G GGP  NP     
Sbjct: 15  IAAAKVLAENGIEDLVILEASDRVGGRIRKESFGGVSVELGAGWIAGVGGPQPNPVWELG 74

Query: 60  XXXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFCAAFSKKLSVQKKDI 119
                    +DY N   N Y ++G + P  +    D    A+D   +A  K   +++++ 
Sbjct: 75  VQFGLRTCFSDYSNARYNIYDRSGNIIPSGIAA--DSYKKAVD---SAIEKLRKLEEEEA 129

Query: 120 DVSILAAQRIF--KKAPTSPLEMVIDYYHNDFEDAEPPKVTSLKHTYPRNELVDHGEDEY 177
              +    R F  +K P +P+E+ ID+  +DFE AE           P +  VD GE EY
Sbjct: 130 TAYVQIPARRFQPQKTPETPIELAIDFILHDFEMAE---------VEPISTYVDFGEREY 180

Query: 178 FVADPRGFEIIVQYLAKQFL---SSLTKDPRLKLNKVIR 213
           FVAD RG++ ++  +A++FL        D RLKLNKV+R
Sbjct: 181 FVADERGYDYLLYKMAEEFLFTSKGRILDNRLKLNKVVR 219


>Glyma10g11700.1 
          Length = 506

 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 42/244 (17%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFG-GGPVFNPXXXXX 59
           I AAK + E G++D++ILEAS R+GGR+ K  F G+TVE GA W+ G GG   NP     
Sbjct: 15  IAAAKVLAENGVEDLVILEASDRVGGRICKESFGGVTVELGAGWIAGVGGQQPNPIWELA 74

Query: 60  XXXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFC----------AAFS 109
                    +DY N   N Y ++G + P ++    D    A+D              A++
Sbjct: 75  AQFELRTCFSDYSNARYNIYDRSGNIIPSEIAA--DSYKKAVDSAIQKLRNQEEEEEAYA 132

Query: 110 KKLSVQK-KDIDVSILAAQRI----------------FKKAPTSPLEMVIDYYHNDFEDA 152
           K+  ++K K + V                        F+  P +P+E+ ID+  +DFE A
Sbjct: 133 KRNCLRKCKSLRVIFSRKSHFLNVLLYIINHAFNYFPFELTPETPIELAIDFILHDFEMA 192

Query: 153 EPPKVTSLKHTYPRNELVDHGEDEYFVADPRGFEIIVQYLAKQFL---SSLTKDPRLKLN 209
           E   ++    TY     VD GE E+ VAD RG++ ++  +A++FL        D RLKLN
Sbjct: 193 EVEPIS----TY-----VDFGEREFLVADERGYDYLLYKMAEEFLFTSEGRILDNRLKLN 243

Query: 210 KVIR 213
           KV+R
Sbjct: 244 KVVR 247


>Glyma09g36150.1 
          Length = 465

 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 22/217 (10%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFG-GGPVFNPXXXXX 59
           I+AAK + E G++D++ILEAS+ IGGR+ K  F G++VE GA W+ G GG   NP     
Sbjct: 19  ISAAKLLAENGVKDLVILEASNCIGGRIRKENFGGVSVELGAGWIVGVGGKESNPIWELV 78

Query: 60  XXXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFCAAFSKKLSVQKKDI 119
                    +DY N+  N Y ++G ++   +    D    A+D      + +    ++  
Sbjct: 79  AEYGLRTCFSDYTNVPYNIYDRSGKIFSSGIAA--DSYKKAVDSAIRNLTNQEEADRE-- 134

Query: 120 DVSILAAQRIFKKAPTSPLEMVIDYYHNDFEDAEPPKVTSLKHTYPRNELVDHGEDEYFV 179
                       + P+SPLE+ ID+  +DFE AE           P +     GE E+ V
Sbjct: 135 -----GNSSKTTEPPSSPLELAIDFILHDFEMAE---------AVPISTFTAFGEREFLV 180

Query: 180 ADPRGFEIIVQYLAKQF-LSSLTK--DPRLKLNKVIR 213
           AD RGF+ +V  +A+ F L+S  K  D RLKLN V+R
Sbjct: 181 ADERGFDYLVYKMAEDFLLTSEGKILDTRLKLNHVVR 217


>Glyma02g02240.1 
          Length = 347

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 113/226 (50%), Gaps = 23/226 (10%)

Query: 1   ITAAKSIHEAGIQDILILEASHRIGGRLMKTQFSGLTVEKGANWLFG-GGPVFNPXXXXX 59
           I+AAK + E G++D++ILEAS+ IGGR+ K  F G++VE GA W+ G GG   NP     
Sbjct: 1   ISAAKLLAENGVKDLVILEASNCIGGRIRKENFGGVSVELGAGWIVGVGGKESNPIWELV 60

Query: 60  XXXXXXXXXNDYQNITSNTYKQNGGLYPKQVVEKIDKVATAMDDFCAAFSKKLSVQKKDI 119
                    +DY N+  N Y ++G ++   +    D    A+D      + +    ++  
Sbjct: 61  AEYGLRTCFSDYTNVPYNIYDRSGKIFSSGIAA--DSYKKAVDSAIRNLTNQEEADRQ-- 116

Query: 120 DVSILAAQRIFKKAPTSPLEMVIDYYHNDFEDA---------EPPKVTSLKHTYPRNELV 170
                       + P+SPLE+ ID+  +DFE A         E  KV   +   P +   
Sbjct: 117 -----GNSSKTTEPPSSPLELAIDFILHDFEMAVSWFMDVCSETVKVVDAEAV-PISTFT 170

Query: 171 DHGEDEYFVADPRGFEIIVQYLAKQF-LSSLTK--DPRLKLNKVIR 213
             GE E+ VAD RGF+ +V  +A+ F L+S  K  D RLKLN V+R
Sbjct: 171 AFGEREFLVADERGFDYLVYKMAEDFLLTSEGKILDTRLKLNHVVR 216