Jatropha Genome Database

JcCB0638431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0638431.10 + phase: 2 /partial
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g26450.1                                                       225   1e-59
Glyma08g09370.1                                                       220   5e-58
Glyma15g10460.2                                                       216   1e-56
Glyma15g10460.1                                                       215   2e-56
Glyma13g28660.1                                                       206   1e-53
Glyma15g10460.3                                                       146   9e-36
Glyma15g10460.4                                                       146   1e-35
Glyma08g09370.2                                                       110   5e-25

>Glyma05g26450.1 
          Length = 353

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 112/146 (76%), Positives = 116/146 (79%), Gaps = 13/146 (8%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AALSWNGEGSFLFTSSSAPYDCNDNG CDEDSP VPIGRSPR DVLL AE VVLE  GC 
Sbjct: 171 AALSWNGEGSFLFTSSSAPYDCNDNGPCDEDSPVVPIGRSPRVDVLLKAENVVLEFGGCV 230

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAIL 121
             L                YKADRGAH Y+LEKG V+ RPDHILNLIHYEDAASLS+AIL
Sbjct: 231 VRLA-------------GLYKADRGAHNYFLEKGVVDSRPDHILNLIHYEDAASLSVAIL 277

Query: 122 KKKFRGQIFLGCDNHPLSRQEVMDLV 147
           KK FRGQIFLGCDNHPLSRQE+MDLV
Sbjct: 278 KKNFRGQIFLGCDNHPLSRQEMMDLV 303


>Glyma08g09370.1 
          Length = 353

 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 110/146 (75%), Positives = 115/146 (78%), Gaps = 13/146 (8%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AALSWNGEGSFLFTSSSAPYDCNDNG CDEDSP VPIGRSP  DVLL AE VVLE  GC 
Sbjct: 171 AALSWNGEGSFLFTSSSAPYDCNDNGPCDEDSPVVPIGRSPGVDVLLKAENVVLEFGGCV 230

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAIL 121
             L                YKADRGAH Y+LEK  V+ RPDH+LNLIHYEDAASLS+AIL
Sbjct: 231 LRLA-------------GLYKADRGAHNYYLEKRIVDSRPDHVLNLIHYEDAASLSVAIL 277

Query: 122 KKKFRGQIFLGCDNHPLSRQEVMDLV 147
           KKKFRGQIFLGCDNHPLSRQE+MDLV
Sbjct: 278 KKKFRGQIFLGCDNHPLSRQEMMDLV 303


>Glyma15g10460.2 
          Length = 319

 Score =  216 bits (549), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 114/146 (78%), Gaps = 13/146 (8%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AA  WNGEG+ LFTSSSAPYDCNDNG C EDSP VP GRSPRTDVLL AEK+VLE  G  
Sbjct: 140 AASCWNGEGALLFTSSSAPYDCNDNGLCHEDSPVVPTGRSPRTDVLLKAEKIVLEFGG-- 197

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAIL 121
                      S   ++  YK D+GAH YWLEKG VE RPDHILNLIHYEDAASLS+AIL
Sbjct: 198 -----------SVLRLSGLYKVDKGAHAYWLEKGIVESRPDHILNLIHYEDAASLSVAIL 246

Query: 122 KKKFRGQIFLGCDNHPLSRQEVMDLV 147
           KK+FRG+IFLGCDNHPLSRQEVMDLV
Sbjct: 247 KKQFRGRIFLGCDNHPLSRQEVMDLV 272


>Glyma15g10460.1 
          Length = 321

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/146 (73%), Positives = 116/146 (79%), Gaps = 13/146 (8%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AA  WNGEG+ LFTSSSAPYDCNDNG C EDSP VP GRSPRTDVLL AEK+VLE  G  
Sbjct: 140 AASCWNGEGALLFTSSSAPYDCNDNGLCHEDSPVVPTGRSPRTDVLLKAEKIVLEFGG-- 197

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAIL 121
                   SV+  + +   YK D+GAH YWLEKG VE RPDHILNLIHYEDAASLS+AIL
Sbjct: 198 --------SVLRLSGL---YKVDKGAHAYWLEKGIVESRPDHILNLIHYEDAASLSVAIL 246

Query: 122 KKKFRGQIFLGCDNHPLSRQEVMDLV 147
           KK+FRG+IFLGCDNHPLSRQEVMDLV
Sbjct: 247 KKQFRGRIFLGCDNHPLSRQEVMDLV 272


>Glyma13g28660.1 
          Length = 272

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 104/147 (70%), Positives = 115/147 (78%), Gaps = 11/147 (7%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AA  WNGEG+ LFTSSSAPYDCNDNG C ED+P VP+GRSPRTDVLL AEK+VLE  G  
Sbjct: 87  AASCWNGEGALLFTSSSAPYDCNDNGLCHEDNPVVPMGRSPRTDVLLKAEKIVLEFGGSV 146

Query: 62  DSL-GFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYEDAASLSIAI 120
             L G  ISS           + ++GAH YWL+KG VE RPDHILNLIHYEDAASLS+AI
Sbjct: 147 LRLSGLYISSS----------EFNKGAHAYWLDKGIVESRPDHILNLIHYEDAASLSVAI 196

Query: 121 LKKKFRGQIFLGCDNHPLSRQEVMDLV 147
           LKK+F G+IFLGCDNHPLSRQEVMDLV
Sbjct: 197 LKKQFHGRIFLGCDNHPLSRQEVMDLV 223


>Glyma15g10460.3 
          Length = 243

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 80/110 (72%), Gaps = 13/110 (11%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AA  WNGEG+ LFTSSSAPYDCNDNG C EDSP VP GRSPRTDVLL AEK+VLE  G  
Sbjct: 140 AASCWNGEGALLFTSSSAPYDCNDNGLCHEDSPVVPTGRSPRTDVLLKAEKIVLEFGG-- 197

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYE 111
                   SV+  + +   YK D+GAH YWLEKG VE RPDHILNLIHYE
Sbjct: 198 --------SVLRLSGL---YKVDKGAHAYWLEKGIVESRPDHILNLIHYE 236


>Glyma15g10460.4 
          Length = 239

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 80/110 (72%), Gaps = 13/110 (11%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AA  WNGEG+ LFTSSSAPYDCNDNG C EDSP VP GRSPRTDVLL AEK+VLE  G  
Sbjct: 140 AASCWNGEGALLFTSSSAPYDCNDNGLCHEDSPVVPTGRSPRTDVLLKAEKIVLEFGG-- 197

Query: 62  DSLGFDISSVISKTLINWPYKADRGAHVYWLEKGTVEVRPDHILNLIHYE 111
                   SV+  + +   YK D+GAH YWLEKG VE RPDHILNLIHYE
Sbjct: 198 --------SVLRLSGL---YKVDKGAHAYWLEKGIVESRPDHILNLIHYE 236


>Glyma08g09370.2 
          Length = 255

 Score =  110 bits (276), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 58/76 (76%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 2   AALSWNGEGSFLFTSSSAPYDCNDNGECDEDSPAVPIGRSPRTDVLLNAEKVVLESNGCA 61
           AALSWNGEGSFLFTSSSAPYDCNDNG CDEDSP VPIGRSP  DVLL AE VVLE  GC 
Sbjct: 171 AALSWNGEGSFLFTSSSAPYDCNDNGPCDEDSPVVPIGRSPGVDVLLKAENVVLEFGGCV 230

Query: 62  DSL-GFDISSVISKTL 76
             L G  IS V  K L
Sbjct: 231 LRLAGLYISLVGCKLL 246