Jatropha Genome Database

JcCB0635861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0635861.10 - phase: 1 /partial
         (323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15800.1                                                       221   1e-57

>Glyma17g15800.1 
          Length = 674

 Score =  221 bits (562), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 114/187 (60%), Positives = 133/187 (71%), Gaps = 2/187 (1%)

Query: 137 VDEESLVRKQSLHILKRVLQISEEGQRNSFVPEKKSREKHSVPHGMTKREMWANKEAKSL 196
           VD+ESLVRKQSLHILK VL I       S + +  + EK SVPHG+TKRE WA KEAKSL
Sbjct: 361 VDKESLVRKQSLHILKMVLNIQGGTNSISSISKGNTNEKCSVPHGVTKREKWAYKEAKSL 420

Query: 197 GVGEICSSIDSPLDIQQQWEAFILQYEMLEEYGTHLVEAAWDHQITLLLQFSVSRDNFAS 256
           GVG +    +  ++ QQ W AF+L YEMLEEYGTHLVEAAW+HQ++LLLQFS S  N  S
Sbjct: 421 GVGNLPMIDELVINSQQYWGAFVLLYEMLEEYGTHLVEAAWNHQVSLLLQFSGSYLNVGS 480

Query: 257 SICGRVCQSEVEDLGEVFTWLTILWQLGFRHDNPQVRCLIMQSFLGIEWMEYGDAAKSVQ 316
           SI     Q++ E  GE F WL+ILW+ G  HDNPQVRCLIMQSFL I W  YG+  KSV 
Sbjct: 481 SISK--VQNQFEMYGETFDWLSILWERGLHHDNPQVRCLIMQSFLDINWENYGNYIKSVP 538

Query: 317 RSFVLGP 323
            +FVLGP
Sbjct: 539 ETFVLGP 545



 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 103/170 (60%), Gaps = 10/170 (5%)

Query: 1   SWGVLEATLVPFFLRSAGLSVGMSQNEESDIFEWDQYSVLQ-GLDGMIDNLNLDKEFILS 59
           +W VLEAT VP FLRS GLS+GM  N++ D +EW   S  Q   D MID L +DKE +LS
Sbjct: 129 AWEVLEATSVPIFLRSVGLSMGMLHNDDLDFYEWSSNSSHQDSYDVMIDPL-MDKELLLS 187

Query: 60  LSGSFPLSISCHVLTLILDSALQSFQAASTTESMLENDSCYADQLFSKLLWDLCNMSERL 119
           LS SF L  SC++L++IL++ALQ  Q  +  +S  E   C  D+  + L+W+L NM ER+
Sbjct: 188 LSNSFKLLTSCNLLSVILEAALQYMQTDTLPKSA-ERKGCIVDKFVNILIWELSNMIERM 246

Query: 120 FSRSLEHRSCAISFLLPVDEESLVRKQSLHILKRVLQISEEGQRNSFVPE 169
              S EHRSCA+  LLP+  ++L    S        +IS  GQ++ F  E
Sbjct: 247 LLHSPEHRSCAVGLLLPIILKALPANGS-------FEISIRGQKHGFSRE 289